Variant report

Variant	rs7746930
Chromosome Location	chr6:44533903-44533904
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44532570..44534270-chr6:44534486..44536425,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1407562	1.00[ASN][1000 genomes]
rs1407563	0.89[ASN][1000 genomes]
rs1853306	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1853307	1.00[ASN][1000 genomes]
rs6923772	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7765458	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs927486	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527194	chr6:44523591-44534397	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44527600-44535400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:44529800-44535000	Weak transcription	Primary hematopoietic stem cells	blood
3	chr6:44530000-44535200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:44530000-44537600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr6:44530200-44535000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:44531400-44536600	Weak transcription	Right Atrium	heart
7	chr6:44531400-44536800	Weak transcription	Left Ventricle	heart
8	chr6:44531400-44537000	Weak transcription	Ovary	ovary
9	chr6:44531600-44536800	Weak transcription	Right Ventricle	heart
10	chr6:44531600-44537200	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr6:44532000-44534400	Weak transcription	Pancreas	Pancrea
12	chr6:44532000-44537000	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr6:44532200-44535000	Weak transcription	Monocytes-CD14+_RO01746	blood
14	chr6:44532600-44537400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr6:44532600-44537400	Weak transcription	HUES6 Cell Line	embryonic stem cell
16	chr6:44533000-44536800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr6:44533200-44535000	Weak transcription	Primary monocytes fromperipheralblood	blood
18	chr6:44533200-44537400	Weak transcription	HSMM	muscle
19	chr6:44533200-44537600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr6:44533400-44536800	Weak transcription	HSMMtube	muscle
21	chr6:44533800-44534400	Enhancers	Spleen	Spleen

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