Variant report

Variant	rs7750118
Chromosome Location	chr6:81731804-81731805
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:81731744..81734648-chr6:81746656..81748984,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12333152	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12333277	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1460186	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16892458	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16892604	1.00[EUR][1000 genomes]
rs16892651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16892697	1.00[EUR][1000 genomes]
rs4351211	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4351212	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4470815	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4543324	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55908144	1.00[EUR][1000 genomes]
rs56790428	1.00[EUR][1000 genomes]
rs6454201	1.00[EUR][1000 genomes]
rs6899674	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6901453	1.00[EUR][1000 genomes]
rs6915009	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6938275	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6940665	1.00[EUR][1000 genomes]
rs73463365	1.00[EUR][1000 genomes]
rs73471358	1.00[EUR][1000 genomes]
rs9443847	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449173	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449180	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449181	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9449183	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531333	chr6:81042427-81836484	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv886315	chr6:81352515-81946866	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv886318	chr6:81447367-81769538	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2762604	chr6:81593275-81742093	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv428487	chr6:81607405-81742838	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv830709	chr6:81615127-81793247	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv886319	chr6:81670720-81741457	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv886320	chr6:81670720-81960107	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv886321	chr6:81707510-81934605	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv1016229	chr6:81722231-81881073	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv830710	chr6:81727702-81889039	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv1033949	chr6:81731577-81872706	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81730800-81732600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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