Variant report

Variant	rs7768273
Chromosome Location	chr6:143299820-143299821
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs59123279	0.83[AMR][1000 genomes]
rs73588427	0.83[AMR][1000 genomes]
rs7766704	0.83[AMR][1000 genomes]
rs9484678	0.83[AMR][1000 genomes]
rs9484684	0.87[AFR][1000 genomes]
rs9496484	0.83[AMR][1000 genomes]
rs9496485	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv538459	chr6:143165802-143360098	Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	esv3438270	chr6:143297059-143301357	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3438680	chr6:143298659-143302957	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143299600-143300000	Enhancers	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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