Variant report

Variant	rs7773215
Chromosome Location	chr6:12492656-12492657
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11969434	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1334306	1.00[AMR][1000 genomes]
rs1334307	1.00[AMR][1000 genomes]
rs1855528	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60093648	0.93[ASN][1000 genomes]
rs60696643	0.93[ASN][1000 genomes]
rs6458304	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6458305	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6914085	0.93[ASN][1000 genomes]
rs6916137	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6916851	1.00[AMR][1000 genomes]
rs73722796	1.00[AMR][1000 genomes]
rs9462819	1.00[AMR][1000 genomes]
rs9471916	0.98[AFR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9471918	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:12489600-12493000	Enhancers	NHDF-Ad	bronchial
2	chr6:12490000-12493000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr6:12490200-12493200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr6:12490200-12493600	Enhancers	Hela-S3	cervix
5	chr6:12490400-12493000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr6:12491200-12493200	Enhancers	HUVEC	blood vessel
7	chr6:12491800-12493000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr6:12491800-12493000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr6:12491800-12494600	Weak transcription	Pancreas	Pancrea
10	chr6:12492000-12493200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr6:12492000-12494200	Weak transcription	Spleen	Spleen
12	chr6:12492000-12506000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr6:12492200-12493000	Weak transcription	A549	lung
14	chr6:12492400-12494000	Weak transcription	Placenta	Placenta
15	chr6:12492600-12493800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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