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Variant report
Variant
rs7773514
Chromosome Location
chr6:26591761-26591762
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:5)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:5 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr6:26586469..26589101-chr6:26591005..26592761,2
K562
blood:
2
chr6:26158173..26160142-chr6:26590992..26593219,3
K562
blood:
3
chr6:26590700..26592506-chr6:26594678..26597561,2
MCF-7
breast:
4
chr6:26571551..26574960-chr6:26589936..26592999,3
MCF-7
breast:
5
chr6:26581396..26586059-chr6:26589997..26593151,4
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000158373
Chromatin interaction
ENSG00000146109
Chromatin interaction
Extended variants information (count: 3 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:2)
rs_ID
r
2
[population]
rs34905463
0.83[AFR][1000 genomes]
rs61732157
0.83[AFR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv948921
chr6:26556890-27443957
Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
472 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links