Variant report

Variant	rs77910975
Chromosome Location	chr11:10523989-10523990
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	esv3340349	chr11:10519876-10524074	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv972946	chr11:10523147-10534985	Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10495000-10528000	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr11:10495200-10530800	Strong transcription	Primary T cells from cord blood	blood
3	chr11:10495800-10529800	Strong transcription	Primary T helper cells fromperipheralblood	blood
4	chr11:10496400-10524000	Strong transcription	Primary hematopoietic stem cells	blood
5	chr11:10496600-10529000	Strong transcription	Primary T helper cells PMA-I stimulated	--
6	chr11:10501600-10550600	Weak transcription	Small Intestine	intestine
7	chr11:10502600-10529000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
8	chr11:10502600-10560800	Weak transcription	Fetal Brain Male	brain
9	chr11:10507800-10544800	Weak transcription	Fetal Kidney	kidney
10	chr11:10510400-10524800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr11:10510400-10528200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr11:10510600-10527800	Strong transcription	Thymus	Thymus
13	chr11:10510800-10528400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr11:10511000-10529600	Strong transcription	Fetal Thymus	thymus
15	chr11:10511000-10533200	Strong transcription	Primary T cells fromperipheralblood	blood
16	chr11:10512400-10526200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr11:10512400-10526800	Strong transcription	NHEK	skin
18	chr11:10512600-10525400	Weak transcription	GM12878-XiMat	blood
19	chr11:10512800-10526800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr11:10512800-10531600	Weak transcription	Stomach Mucosa	stomach
21	chr11:10512800-10540400	Weak transcription	Fetal Lung	lung
22	chr11:10512800-10548600	Weak transcription	Right Ventricle	heart
23	chr11:10513000-10525200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr11:10513000-10526800	Weak transcription	HMEC	breast
25	chr11:10513000-10531800	Weak transcription	HUES64 Cell Line	embryonic stem cell
26	chr11:10513200-10526000	Weak transcription	Psoas Muscle	Psoas
27	chr11:10513200-10527600	Weak transcription	Right Atrium	heart
28	chr11:10513200-10538000	Weak transcription	Left Ventricle	heart
29	chr11:10513400-10536000	Weak transcription	A549	lung
30	chr11:10513800-10528200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
31	chr11:10514000-10527200	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr11:10514200-10524000	Weak transcription	NHDF-Ad	bronchial
33	chr11:10514200-10525000	Strong transcription	Muscle Satellite Cultured Cells	--
34	chr11:10514200-10529600	Strong transcription	Skeletal Muscle Female	skeletal muscle
35	chr11:10514400-10524200	Strong transcription	Gastric	stomach
36	chr11:10514400-10524600	Strong transcription	Brain Inferior Temporal Lobe	brain
37	chr11:10514400-10525200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
38	chr11:10514400-10526000	Strong transcription	Brain Anterior Caudate	brain
39	chr11:10514600-10524400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr11:10514600-10524600	Strong transcription	Sigmoid Colon	Sigmoid Colon
41	chr11:10514600-10531400	Weak transcription	HUES48 Cell Line	embryonic stem cell
42	chr11:10514600-10535600	Weak transcription	HSMM	muscle
43	chr11:10514800-10524600	Strong transcription	Lung	lung
44	chr11:10514800-10528200	Strong transcription	Skeletal Muscle Male	skeletal muscle
45	chr11:10515000-10527000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr11:10515000-10528200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr11:10515800-10524600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
48	chr11:10515800-10540600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr11:10516000-10544000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
50	chr11:10516400-10524600	Strong transcription	Fetal Intestine Small	intestine

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