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Variant report
Variant
rs7799221
Chromosome Location
chr7:147091689-147091690
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
No data
No data
No data
No data
No data
Extended variants information (count: 8 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:6)
rs_ID
r
2
[population]
rs10500189
0.83[YRI][hapmap];0.83[AFR][1000 genomes]
rs17170475
1.00[AMR][1000 genomes]
rs17170500
0.83[YRI][hapmap]
rs6950313
0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6950773
0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7782763
0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv931005
chr7:146730472-147381257
Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
7 gene(s)
inside rSNPs
diseases
2
nsv1033398
chr7:146989035-147101573
Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats
TF binding regionCpG islandChromatin interactive regionmiRNA
1 gene(s)
inside rSNPs
n/a
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links