The 2.0 version of rSNPBase

Variant report

Variant rs7800938
Chromosome Location chr7:11165382-11165383
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:11046200-11175000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr7:11046600-11167800 Weak transcription Thymus Thymus
3 chr7:11057800-11190200 Weak transcription Fetal Brain Male brain
4 chr7:11076400-11193200 Weak transcription Ovary ovary
5 chr7:11091800-11174200 Weak transcription Left Ventricle heart
6 chr7:11102200-11189200 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr7:11102400-11167800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr7:11102600-11173200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr7:11102600-11173400 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr7:11102600-11190400 Weak transcription Duodenum Mucosa Duodenum
11 chr7:11103000-11189000 Weak transcription Primary T cells fromperipheralblood blood
12 chr7:11107600-11212200 Weak transcription Fetal Kidney kidney
13 chr7:11113200-11211800 Weak transcription Fetal Intestine Large intestine
14 chr7:11113600-11166600 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr7:11114600-11210000 Weak transcription Fetal Brain Female brain
16 chr7:11118000-11199000 Weak transcription HSMM muscle
17 chr7:11122800-11169800 Weak transcription Fetal Muscle Leg muscle
18 chr7:11122800-11173000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr7:11123000-11173200 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr7:11123000-11177800 Weak transcription HepG2 liver
21 chr7:11123400-11169800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr7:11125400-11188000 Weak transcription Small Intestine intestine
23 chr7:11125800-11167000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr7:11134800-11166600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr7:11138800-11169400 Weak transcription Muscle Satellite Cultured Cells --
26 chr7:11140800-11167000 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr7:11141000-11173400 Weak transcription NHEK skin
28 chr7:11142400-11167800 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr7:11144400-11169800 Weak transcription HUVEC blood vessel
30 chr7:11144400-11173600 Weak transcription Liver Liver
31 chr7:11144600-11166600 Weak transcription Fetal Thymus thymus
32 chr7:11144600-11167000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr7:11144600-11184800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr7:11144600-11191000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr7:11148000-11192200 Weak transcription Fetal Stomach stomach
36 chr7:11148600-11174400 Weak transcription A549 lung
37 chr7:11149200-11191200 Weak transcription Stomach Smooth Muscle stomach
38 chr7:11149600-11171400 Weak transcription Pancreas Pancrea
39 chr7:11149800-11171600 Weak transcription Aorta Aorta
40 chr7:11150800-11178400 Weak transcription Brain Cingulate Gyrus brain
41 chr7:11150800-11188200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr7:11151200-11174200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr7:11151400-11167400 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr7:11151400-11176200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr7:11151800-11178400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr7:11152800-11166000 Weak transcription Rectal Smooth Muscle rectum
47 chr7:11154400-11168000 Weak transcription Brain Anterior Caudate brain
48 chr7:11155400-11166800 Weak transcription Primary T cells from cord blood blood
49 chr7:11156200-11165600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr7:11156400-11166600 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015