Variant report

Variant rs7804578
Chromosome Location chr7:56034738-56034739
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:56032800-56035000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
2 chr7:56033000-56039200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr7:56033200-56034800 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr7:56033200-56034800 Enhancers Brain Inferior Temporal Lobe brain
5 chr7:56033200-56034800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr7:56033200-56035400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr7:56033200-56036200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr7:56033200-56036800 Weak transcription Ovary ovary
9 chr7:56033200-56045400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr7:56033200-56045600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr7:56033200-56045600 Weak transcription Aorta Aorta
12 chr7:56033200-56045800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr7:56033200-56048600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr7:56033200-56050400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr7:56033200-56081400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr7:56033400-56035000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
17 chr7:56033400-56040400 Weak transcription Small Intestine intestine
18 chr7:56033400-56045200 Weak transcription HUVEC blood vessel
19 chr7:56033400-56045600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr7:56033400-56045600 Weak transcription Primary B cells from peripheral blood blood
21 chr7:56033400-56047000 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr7:56033400-56047600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr7:56033600-56034800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr7:56033600-56035000 Enhancers Brain Germinal Matrix brain
25 chr7:56033600-56036000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr7:56033600-56036800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr7:56033600-56037800 Weak transcription Primary B cells from cord blood blood
28 chr7:56033600-56045600 Weak transcription H9 Cell Line embryonic stem cell
29 chr7:56033800-56035000 Enhancers Cortex derived primary cultured neurospheres brain
30 chr7:56033800-56035000 Genic enhancers Fetal Muscle Leg muscle
31 chr7:56033800-56035000 Genic enhancers Fetal Stomach stomach
32 chr7:56033800-56035200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr7:56033800-56035200 Genic enhancers Dnd41 blood
34 chr7:56033800-56035400 Enhancers Lung lung
35 chr7:56033800-56036400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr7:56033800-56036400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr7:56033800-56036800 Weak transcription Primary T cells from cord blood blood
38 chr7:56033800-56037200 Weak transcription Primary T cells fromperipheralblood blood
39 chr7:56033800-56038200 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr7:56033800-56038400 Weak transcription H1 Cell Line embryonic stem cell
41 chr7:56033800-56038400 Weak transcription HSMMtube muscle
42 chr7:56033800-56038600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr7:56033800-56038600 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr7:56033800-56038600 Weak transcription Stomach Mucosa stomach
45 chr7:56033800-56039000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr7:56033800-56039400 Strong transcription Fetal Intestine Small intestine
47 chr7:56033800-56045400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr7:56033800-56045400 Weak transcription Hela-S3 cervix
49 chr7:56033800-56045400 Weak transcription HSMM muscle
50 chr7:56033800-56045600 Weak transcription Placenta Placenta

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