Variant report

Variant	rs7807433
Chromosome Location	chr7:8002823-8002824
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:7996704..7998503-chr7:8001009..8003822,2	K562	blood:
2	chr7:7998875..8000886-chr7:8001322..8003740,2	MCF-7	breast:
3	chr7:7987002..7988972-chr7:8001307..8003918,2	K562	blood:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs13222222	0.83[EUR][1000 genomes]
rs13223417	0.83[EUR][1000 genomes]
rs13223995	0.83[EUR][1000 genomes]
rs13237185	0.83[EUR][1000 genomes]
rs13239966	0.83[EUR][1000 genomes]
rs13240739	0.83[EUR][1000 genomes]
rs13242904	0.83[EUR][1000 genomes]
rs13245917	0.83[EUR][1000 genomes]
rs34318095	0.83[EUR][1000 genomes]
rs34475980	0.83[EUR][1000 genomes]
rs34783749	0.83[EUR][1000 genomes]
rs34955320	0.83[EUR][1000 genomes]
rs35044198	0.83[EUR][1000 genomes]
rs35108922	0.83[EUR][1000 genomes]
rs35171936	0.83[EUR][1000 genomes]
rs35225784	0.83[EUR][1000 genomes]
rs35240411	0.83[EUR][1000 genomes]
rs35394048	0.83[EUR][1000 genomes]
rs35572840	0.83[EUR][1000 genomes]
rs35627160	0.83[EUR][1000 genomes]
rs35630009	0.83[EUR][1000 genomes]
rs36015287	0.83[EUR][1000 genomes]
rs36022646	0.83[EUR][1000 genomes]
rs36028057	0.83[EUR][1000 genomes]
rs58769447	0.89[EUR][1000 genomes]
rs6969431	0.83[EUR][1000 genomes]
rs71533384	0.83[EUR][1000 genomes]
rs71533385	0.83[EUR][1000 genomes]
rs71533389	0.83[EUR][1000 genomes]
rs71533390	0.83[EUR][1000 genomes]
rs7794417	0.94[EUR][1000 genomes]
rs7800750	0.89[EUR][1000 genomes]
rs7801299	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026758	chr7:7187491-8075259	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
2	nsv1032670	chr7:7535515-8017077	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
3	esv2752177	chr7:7729247-8177689	Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
4	nsv917172	chr7:7854632-8807385	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
5	nsv1030180	chr7:7860424-8059221	Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
6	esv3346837	chr7:7915187-8068557	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
7	nsv1020161	chr7:7929384-8047553	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:7985000-8003800	Weak transcription	Primary B cells from cord blood	blood
2	chr7:7985400-8007600	Weak transcription	Psoas Muscle	Psoas
3	chr7:7986800-8007800	Weak transcription	Ovary	ovary
4	chr7:7996800-8007400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr7:8000200-8003600	Enhancers	GM12878-XiMat	blood
6	chr7:8001800-8003000	Enhancers	Muscle Satellite Cultured Cells	--
7	chr7:8002000-8003200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr7:8002200-8003000	Enhancers	NHDF-Ad	bronchial
9	chr7:8002200-8003200	Enhancers	Osteobl	bone
10	chr7:8002400-8003000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr7:8002600-8003200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr7:8002600-8003200	Enhancers	NH-A	brain
13	chr7:8002600-8007800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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