Variant report

Variant	rs7808684
Chromosome Location	chr7:150843250-150843251
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:150833743..150841006-chr7:150841442..150846687,15	K562	blood:

Variant related genes	Relation type
ENSG00000133612	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10238030	0.81[EUR][1000 genomes]
rs11975799	1.00[CHB][hapmap]
rs3815980	1.00[JPT][hapmap]
rs7810706	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs919533	1.00[CEU][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1821419	chr7:150593315-150974269	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	128 gene(s)	inside rSNPs	diseases
2	nsv539198	chr7:150643928-150879259	Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
3	nsv889476	chr7:150729212-150951819	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	120 gene(s)	inside rSNPs	diseases
4	nsv889478	chr7:150732812-150889527	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
5	nsv831188	chr7:150735204-150912875	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
6	nsv889482	chr7:150766799-150851566	Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
7	nsv889486	chr7:150775306-150891641	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
8	nsv609034	chr7:150830015-150893629	Enhancers Active TSS Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:102 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:150813000-150843800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
2	chr7:150815600-150843400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr7:150816200-150844000	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr7:150824000-150843600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr7:150829600-150845400	Weak transcription	NHDF-Ad	bronchial
6	chr7:150830200-150844600	Weak transcription	Small Intestine	intestine
7	chr7:150832400-150844200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr7:150833000-150845400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr7:150833400-150845200	Weak transcription	Primary T cells fromperipheralblood	blood
10	chr7:150834000-150844800	Weak transcription	NH-A	brain
11	chr7:150834000-150847200	Weak transcription	Hela-S3	cervix
12	chr7:150836000-150843600	Strong transcription	Fetal Stomach	stomach
13	chr7:150836000-150848200	Weak transcription	Right Atrium	heart
14	chr7:150838400-150843600	Weak transcription	Dnd41	blood
15	chr7:150839400-150844400	Weak transcription	HepG2	liver
16	chr7:150841000-150843400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr7:150841200-150843400	Strong transcription	HSMM	muscle
18	chr7:150841200-150843800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr7:150841200-150843800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr7:150841200-150844000	Weak transcription	H1 Cell Line	embryonic stem cell
21	chr7:150841200-150844800	Weak transcription	Fetal Brain Male	brain
22	chr7:150841400-150843400	Strong transcription	Fetal Muscle Trunk	muscle
23	chr7:150841400-150843400	Weak transcription	GM12878-XiMat	blood
24	chr7:150841400-150843600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr7:150841400-150844000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr7:150841400-150844000	Weak transcription	Brain Angular Gyrus	brain
27	chr7:150841400-150844600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
28	chr7:150841400-150844800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr7:150841400-150845400	Weak transcription	A549	lung
30	chr7:150841400-150845600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr7:150841400-150846000	Weak transcription	HSMMtube	muscle
32	chr7:150841400-150862800	Weak transcription	Skeletal Muscle Male	skeletal muscle
33	chr7:150841600-150843600	Weak transcription	HUES64 Cell Line	embryonic stem cell
34	chr7:150841600-150844200	Weak transcription	Rectal Mucosa Donor 29	rectum
35	chr7:150841600-150845000	Weak transcription	Primary T cells from cord blood	blood
36	chr7:150841600-150845000	Weak transcription	K562	blood
37	chr7:150841600-150845800	Weak transcription	HUVEC	blood vessel
38	chr7:150841600-150846000	Weak transcription	Placenta Amnion	Placenta Amnion
39	chr7:150841600-150847000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
40	chr7:150841800-150843800	Weak transcription	NHLF	lung
41	chr7:150841800-150844000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
42	chr7:150841800-150844000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
43	chr7:150841800-150844200	Weak transcription	Colon Smooth Muscle	Colon
44	chr7:150841800-150844600	Weak transcription	Fetal Lung	lung
45	chr7:150841800-150844800	Strong transcription	Skeletal Muscle Female	skeletal muscle
46	chr7:150841800-150845200	Weak transcription	Duodenum Smooth Muscle	Duodenum
47	chr7:150841800-150845600	Weak transcription	Lung	lung
48	chr7:150841800-150845800	Weak transcription	Spleen	Spleen
49	chr7:150841800-150847000	Weak transcription	Esophagus	oesophagus
50	chr7:150841800-150847600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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