Variant report

Variant	rs7813923
Chromosome Location	chr8:66847843-66847844
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs56256477	1.00[AMR][1000 genomes]
rs56665861	1.00[AMR][1000 genomes]
rs57152556	1.00[AMR][1000 genomes]
rs57973039	1.00[AMR][1000 genomes]
rs73693412	1.00[AMR][1000 genomes]
rs73693414	1.00[AMR][1000 genomes]
rs73693415	1.00[AMR][1000 genomes]
rs73693417	1.00[AMR][1000 genomes]
rs73693421	1.00[AMR][1000 genomes]
rs73693425	1.00[AMR][1000 genomes]
rs73693431	1.00[AMR][1000 genomes]
rs73693434	1.00[AMR][1000 genomes]
rs73693437	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv1023239	chr8:66775321-66904124	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66846000-66848000	ZNF genes & repeats	Dnd41	blood
2	chr8:66846200-66849600	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
3	chr8:66846400-66848000	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
4	chr8:66846400-66854400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:66846600-66848800	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
6	chr8:66847000-66849000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr8:66847600-66849000	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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