Variant report

Variant	rs7826868
Chromosome Location	chr8:91297116-91297117
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10113268	0.80[CEU][hapmap]
rs2107071	0.81[AMR][1000 genomes]
rs2189251	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2189264	0.81[EUR][1000 genomes]
rs2214416	0.81[AMR][1000 genomes]
rs2339111	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28546857	0.80[EUR][1000 genomes]
rs4735384	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4735390	0.82[EUR][1000 genomes]
rs726619	0.81[AMR][1000 genomes]
rs760280	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7823556	0.85[CEU][hapmap];0.82[TSI][hapmap]
rs983139	0.85[CEU][hapmap];0.82[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91293600-91297200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr8:91293800-91297200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr8:91294400-91297200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr8:91296400-91299800	Strong transcription	K562	blood
5	chr8:91297000-91297600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr8:91297000-91297600	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr8:91297000-91297600	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr8:91297000-91297600	Enhancers	iPS-20b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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