Variant report

Variant	rs7829689
Chromosome Location	chr8:34412587-34412588
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10107624	0.90[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs16882460	0.96[ASN][1000 genomes]
rs4739366	0.88[ASN][1000 genomes]
rs4739580	0.90[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs4739589	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs55787309	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs56036407	0.96[ASN][1000 genomes]
rs56091526	0.99[ASN][1000 genomes]
rs56406211	0.94[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs7004498	0.80[ASN][1000 genomes]
rs72640929	0.99[ASN][1000 genomes]
rs72640930	0.99[ASN][1000 genomes]
rs72640938	0.96[ASN][1000 genomes]
rs7832131	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7833602	0.91[EUR][1000 genomes]
rs953272	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3428603	chr8:34367445-34422532	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34411800-34412600	Enhancers	Liver	Liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links