Variant report

Variant	rs7834014
Chromosome Location	chr8:107774819-107774820
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:107774648..107776061-chr8:107868448..107869328,4	K562	blood:
2	chr8:107774167..107775128-chr8:107845360..107846184,2	K562	blood:
3	chr8:107770129..107772071-chr8:107772646..107775395,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11996466	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1784480	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831419	chr8:107624709-107827801	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1032991	chr8:107756661-107819035	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:72 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107719600-107775200	Weak transcription	Gastric	stomach
2	chr8:107719600-107777800	Weak transcription	Esophagus	oesophagus
3	chr8:107739000-107775200	Weak transcription	A549	lung
4	chr8:107740000-107775200	Weak transcription	Ovary	ovary
5	chr8:107740200-107783800	Weak transcription	Fetal Brain Male	brain
6	chr8:107740800-107775200	Weak transcription	Brain Substantia Nigra	brain
7	chr8:107749400-107775200	Weak transcription	HMEC	breast
8	chr8:107753600-107777400	Weak transcription	HUVEC	blood vessel
9	chr8:107753800-107775200	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr8:107754200-107775200	Weak transcription	Pancreas	Pancrea
11	chr8:107754800-107775200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr8:107755800-107777800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr8:107756000-107775000	Weak transcription	Fetal Heart	heart
14	chr8:107756400-107775000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr8:107756400-107777800	Weak transcription	HUES6 Cell Line	embryonic stem cell
16	chr8:107756600-107775200	Weak transcription	Brain Angular Gyrus	brain
17	chr8:107756600-107775200	Weak transcription	Brain Anterior Caudate	brain
18	chr8:107756600-107775200	Weak transcription	Fetal Intestine Large	intestine
19	chr8:107756600-107775200	Weak transcription	Fetal Kidney	kidney
20	chr8:107756600-107775200	Weak transcription	Fetal Muscle Leg	muscle
21	chr8:107756600-107775200	Weak transcription	Stomach Smooth Muscle	stomach
22	chr8:107756600-107777400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr8:107756600-107777400	Weak transcription	Psoas Muscle	Psoas
24	chr8:107756600-107777600	Weak transcription	Fetal Brain Female	brain
25	chr8:107756800-107775200	Weak transcription	Brain Cingulate Gyrus	brain
26	chr8:107756800-107775200	Weak transcription	Osteobl	bone
27	chr8:107757200-107775200	Weak transcription	NHDF-Ad	bronchial
28	chr8:107759800-107775200	Weak transcription	Fetal Thymus	thymus
29	chr8:107760200-107775800	Weak transcription	Right Ventricle	heart
30	chr8:107761400-107777600	Weak transcription	Fetal Stomach	stomach
31	chr8:107761600-107775200	Weak transcription	Fetal Intestine Small	intestine
32	chr8:107761600-107775600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr8:107764400-107775200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr8:107764400-107775200	Weak transcription	Liver	Liver
35	chr8:107764400-107775200	Weak transcription	Colon Smooth Muscle	Colon
36	chr8:107764400-107775200	Weak transcription	Duodenum Mucosa	Duodenum
37	chr8:107764600-107775200	Weak transcription	Fetal Lung	lung
38	chr8:107765400-107777200	Weak transcription	HSMM	muscle
39	chr8:107765600-107775200	Weak transcription	Duodenum Smooth Muscle	Duodenum
40	chr8:107767600-107775000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
41	chr8:107768000-107775200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr8:107768000-107775200	Weak transcription	Rectal Smooth Muscle	rectum
43	chr8:107768200-107775200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
44	chr8:107768400-107775200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr8:107768400-107775200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
46	chr8:107768400-107775200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr8:107769200-107775200	Weak transcription	Adipose Nuclei	Adipose
48	chr8:107770200-107775200	Weak transcription	Brain Hippocampus Middle	brain
49	chr8:107771200-107776200	Enhancers	Primary T helper cells PMA-I stimulated	--
50	chr8:107771400-107775200	Enhancers	Primary T helper naive cells from peripheral blood	blood

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