Variant report

Variant	rs7834526
Chromosome Location	chr8:67063042-67063043
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:67054265..67056462-chr8:67061236..67063403,2	MCF-7	breast:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs16932554	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs16932561	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs6472253	0.97[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73249952	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73249993	0.99[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73250000	0.99[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs73693918	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67042600-67069200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr8:67051800-67066000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr8:67053400-67066400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:67053800-67066400	Weak transcription	Fetal Muscle Trunk	muscle
5	chr8:67055600-67068800	Weak transcription	Right Atrium	heart
6	chr8:67055800-67064200	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr8:67055800-67068800	Weak transcription	Right Ventricle	heart
8	chr8:67058200-67064200	Weak transcription	Left Ventricle	heart
9	chr8:67058600-67071400	Weak transcription	Liver	Liver
10	chr8:67059200-67064000	Weak transcription	Fetal Muscle Leg	muscle
11	chr8:67059200-67064200	Weak transcription	Psoas Muscle	Psoas
12	chr8:67059200-67066400	Weak transcription	NHLF	lung
13	chr8:67059400-67066000	Strong transcription	HSMM	muscle
14	chr8:67059400-67066000	Weak transcription	NHDF-Ad	bronchial
15	chr8:67059600-67065400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr8:67059600-67066600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr8:67059600-67066800	Weak transcription	Osteobl	bone
18	chr8:67059600-67067000	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr8:67061200-67065800	Enhancers	Fetal Heart	heart
20	chr8:67061800-67066800	Strong transcription	HSMMtube	muscle
21	chr8:67062000-67064200	Strong transcription	Skeletal Muscle Female	skeletal muscle
22	chr8:67062800-67063400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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