Variant report

Variant	rs7857949
Chromosome Location	chr9:98449514-98449515
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10759205	0.84[AFR][1000 genomes]
rs10816414	0.87[AFR][1000 genomes]
rs10816467	0.83[AFR][1000 genomes]
rs10816468	0.83[AFR][1000 genomes]
rs10816839	0.87[EUR][1000 genomes]
rs10991546	0.81[ASN][1000 genomes]
rs12551252	0.82[ASN][1000 genomes]
rs1335049	0.87[AFR][1000 genomes]
rs16910111	0.82[ASN][1000 genomes]
rs1970200	0.82[ASN][1000 genomes]
rs4743189	0.89[ASN][1000 genomes]
rs915228	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv416250	chr9:98448883-98452564	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:98447200-98450800	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr9:98447800-98452800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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