Variant report

Variant	rs7870079
Chromosome Location	chr9:96161300-96161301
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000048828	Chromatin interaction
ENSG00000197724	Chromatin interaction
ENSG00000201074	Chromatin interaction
ENSG00000188938	Chromatin interaction

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10739949	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10821122	0.80[AMR][1000 genomes]
rs10821123	0.83[CHB][hapmap];0.94[GIH][hapmap];0.84[MEX][hapmap]
rs10821124	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10992729	0.82[AFR][1000 genomes]
rs12379660	0.80[JPT][hapmap];0.81[AFR][1000 genomes]
rs13287066	0.96[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1351117	0.83[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs2151713	0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4481672	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7022679	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96160400-96161400	Enhancers	Lung	lung
2	chr9:96161000-96161600	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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