Variant report

Variant	rs10992729
Chromosome Location	chr9:96181075-96181076
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:96178869..96180391-chr9:96180917..96182559,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000201074	Chromatin interaction

rs_ID	r²[population]
rs10512223	0.82[EUR][1000 genomes]
rs1055710	0.91[EUR][1000 genomes]
rs10761227	0.89[EUR][1000 genomes]
rs10761228	0.86[EUR][1000 genomes]
rs10761229	0.87[EUR][1000 genomes]
rs10761230	0.87[EUR][1000 genomes]
rs10821124	0.88[AFR][1000 genomes]
rs10821128	0.91[EUR][1000 genomes]
rs10821129	0.91[EUR][1000 genomes]
rs10821130	0.91[EUR][1000 genomes]
rs10821134	0.87[EUR][1000 genomes]
rs10821136	0.87[EUR][1000 genomes]
rs10821137	0.87[EUR][1000 genomes]
rs10821138	0.87[EUR][1000 genomes]
rs10821139	0.87[EUR][1000 genomes]
rs10821140	0.81[EUR][1000 genomes]
rs10821141	0.82[EUR][1000 genomes]
rs10821142	0.82[EUR][1000 genomes]
rs10821143	0.82[EUR][1000 genomes]
rs10821145	0.82[EUR][1000 genomes]
rs10821146	0.81[EUR][1000 genomes]
rs10821147	0.81[EUR][1000 genomes]
rs10992746	0.87[EUR][1000 genomes]
rs10992748	0.87[EUR][1000 genomes]
rs10992749	0.86[EUR][1000 genomes]
rs10992751	0.87[EUR][1000 genomes]
rs10992754	0.87[EUR][1000 genomes]
rs10992756	0.82[EUR][1000 genomes]
rs10992757	0.82[EUR][1000 genomes]
rs10992759	0.82[EUR][1000 genomes]
rs11790060	0.90[EUR][1000 genomes]
rs11791374	0.87[EUR][1000 genomes]
rs12377399	0.87[EUR][1000 genomes]
rs12379660	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13287066	0.91[AFR][1000 genomes]
rs1351117	0.95[AFR][1000 genomes];0.80[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1412050	0.81[EUR][1000 genomes]
rs1556416	0.82[EUR][1000 genomes]
rs16909199	0.82[EUR][1000 genomes]
rs2150749	0.82[EUR][1000 genomes]
rs2151713	0.83[AFR][1000 genomes]
rs2297376	0.82[EUR][1000 genomes]
rs34866682	0.87[EUR][1000 genomes]
rs4481672	0.84[AFR][1000 genomes]
rs4743922	0.87[EUR][1000 genomes]
rs4743924	0.82[EUR][1000 genomes]
rs4744240	0.90[EUR][1000 genomes]
rs4744242	0.87[EUR][1000 genomes]
rs4744247	0.82[EUR][1000 genomes]
rs4744249	0.82[EUR][1000 genomes]
rs4744250	0.81[EUR][1000 genomes]
rs7022679	0.88[AFR][1000 genomes]
rs7869969	0.91[EUR][1000 genomes]
rs7870079	0.82[AFR][1000 genomes]

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96179600-96182000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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