Variant report

Variant	rs7915409
Chromosome Location	chr10:18419595-18419596
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10828276	0.92[EUR][1000 genomes]
rs11012800	0.94[EUR][1000 genomes]
rs11012876	0.81[EUR][1000 genomes]
rs12360277	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16916912	0.86[EUR][1000 genomes]
rs16916914	1.00[ASW][hapmap];0.90[TSI][hapmap]
rs16916916	0.94[GIH][hapmap];0.91[TSI][hapmap];0.86[EUR][1000 genomes]
rs17604757	1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2478574	1.00[ASW][hapmap]
rs2497755	1.00[ASW][hapmap]
rs2497761	1.00[ASW][hapmap]
rs41494451	0.94[GIH][hapmap];0.91[TSI][hapmap];0.86[EUR][1000 genomes]
rs7894090	1.00[ASW][hapmap]
rs7906351	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9418383	1.00[ASW][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550039	chr10:18363924-18425519	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18413200-18423400	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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