Variant report

Variant	rs7919436
Chromosome Location	chr10:285200-285201
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:44)
CpG islands
(count:0)
Chromatin interactive
region (count:2)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:44 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr10:285167-285262	Spleen_OC	spleen:	n/a	n/a
2	CTCF	chr10:285118-285333	MCF-7	breast:	n/a	n/a
3	STAT3	chr10:285150-285516	MCF10A-Er-Src	breast:	n/a	n/a
4	CTCF	chr10:285100-285250	HEEpiC	esophagus:	n/a	n/a
5	MAX	chr10:285125-285246	NB4	blood:	n/a	n/a
6	CTCF	chr10:285126-285310	MCF-7	breast:	n/a	n/a
7	STAT3	chr10:285147-285540	MCF10A-Er-Src	breast:	n/a	n/a
8	CTCF	chr10:285133-285301	Gliobla	brain:	n/a	n/a
9	MYC	chr10:285126-285398	MCF10A-Er-Src	breast:	n/a	n/a
10	CTCF	chr10:285140-285290	MCF-7	breast:	n/a	n/a
11	MYC	chr10:285112-285402	MCF10A-Er-Src	breast:	n/a	n/a
12	CTCF	chr10:285160-285274	Hela-S3	cervix:	n/a	n/a
13	RAD21	chr10:284987-285396	A549	lung:	n/a	n/a
14	CTCF	chr10:285160-285310	BE2_C	brain:	n/a	n/a
15	RAD21	chr10:285117-285323	HepG2	liver:	n/a	n/a
16	CTCF	chr10:285080-285230	HBMEC	blood vessel:	n/a	n/a
17	CTCF	chr10:285151-285309	NHEK	skin:	n/a	n/a
18	FOS	chr10:285090-285455	MCF10A-Er-Src	breast:	n/a	n/a
19	FOXA1	chr10:285088-285312	T-47D	breast:	n/a	n/a
20	RAD21	chr10:285111-285434	SK-N-SH_RA	brain:	n/a	n/a
21	CTCF	chr10:285140-285290	SAEC	small airway:	n/a	n/a
22	CTCF	chr10:285096-285324	GM12878	blood:	n/a	n/a
23	CTCF	chr10:285100-285250	HMEC	breast:	n/a	n/a
24	RAD21	chr10:284978-285443	MCF-7	breast:	n/a	n/a
25	CTCF	chr10:285200-285277	A549	lung:	n/a	n/a
26	RAD21	chr10:285105-285342	H1-hESC	embryonic stem cell:	n/a	n/a
27	CTCF	chr10:285080-285230	HA-sp	spinal cord:	n/a	n/a
28	STAT3	chr10:285049-285334	MCF10A-Er-Src	breast:	n/a	n/a
29	RAD21	chr10:285114-285392	Hela-S3	cervix:	n/a	n/a
30	RAD21	chr10:284954-285407	MCF-7	breast:	n/a	n/a
31	RAD21	chr10:285026-285482	HCT-116	colon:	n/a	n/a
32	STAT3	chr10:285120-285494	MCF10A-Er-Src	breast:	n/a	n/a
33	FOS	chr10:285089-285493	MCF10A-Er-Src	breast:	n/a	n/a
34	CTCF	chr10:285060-285210	HA-sp	spinal cord:	n/a	n/a
35	CTCF	chr10:284974-285409	MCF-7	breast:	n/a	n/a
36	CTCF	chr10:285027-285448	MCF-7	breast:	n/a	n/a
37	CTCF	chr10:285160-285310	HEEpiC	esophagus:	n/a	n/a
38	CTCF	chr10:285092-285305	A549	lung:	n/a	n/a
39	CTCF	chr10:285100-285250	NHEK	skin:	n/a	n/a
40	FOS	chr10:285115-285459	MCF10A-Er-Src	breast:	n/a	n/a
41	RAD21	chr10:285131-285353	SK-N-SH_RA	brain:	n/a	n/a
42	RAD21	chr10:284974-285501	HCT-116	colon:	n/a	n/a
43	FOS	chr10:285113-285507	MCF10A-Er-Src	breast:	n/a	n/a
44	E2F4	chr10:285115-285389	MCF10A-Er-Src	breast:	n/a	n/a

No data

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:284740..285439-chr10:835087..835858,2	MCF-7	breast:
2	chr10:285181..287900-chr10:288868..291206,2	K562	blood:

No data

Variant related genes	Relation type
ZMYND11	TF binding region
ENSG00000015171	Chromatin interaction

Extended variants
information (count: 82 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10508201	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs10736951	0.82[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap];0.86[YRI][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10794721	0.82[AMR][1000 genomes]
rs11250790	0.91[CEU][hapmap]
rs11251173	0.86[EUR][1000 genomes]
rs11592007	0.80[EUR][1000 genomes]
rs11592027	0.80[EUR][1000 genomes]
rs12360337	0.81[EUR][1000 genomes]
rs1476130	1.00[CEU][hapmap];0.92[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17221225	0.82[CEU][hapmap];0.81[EUR][1000 genomes]
rs17221239	0.92[CEU][hapmap];0.84[JPT][hapmap];0.90[EUR][1000 genomes]
rs2379049	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2436030	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2436031	0.84[YRI][hapmap]
rs2448364	1.00[CEU][hapmap];0.91[CHB][hapmap];0.92[JPT][hapmap];0.96[YRI][hapmap];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2448366	1.00[CEU][hapmap];0.90[CHB][hapmap];0.92[JPT][hapmap];0.91[YRI][hapmap];0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2448371	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2448373	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2448380	1.00[CEU][hapmap];0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2448381	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2448384	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2496275	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2496278	0.91[CEU][hapmap];0.92[JPT][hapmap];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3131995	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs34926441	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4275539	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4369322	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs56217646	0.80[EUR][1000 genomes]
rs61836334	0.80[EUR][1000 genomes]
rs61836335	0.80[EUR][1000 genomes]
rs7089302	0.80[EUR][1000 genomes]
rs7896421	0.83[CEU][hapmap]
rs7909028	0.81[AMR][1000 genomes]
rs7909116	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7912326	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs7919162	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs891735	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9419432	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9419493	0.81[EUR][1000 genomes]
rs9419496	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:42 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531919	chr10:60001-668649	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv1047925	chr10:224406-316839	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	nsv915562	chr10:224406-332407	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
4	nsv530502	chr10:224406-352113	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
5	nsv817282	chr10:224406-358626	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
6	nsv1041536	chr10:224406-370879	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
7	nsv540389	chr10:224406-370879	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
8	nsv949174	chr10:224406-437940	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
9	nsv1046703	chr10:224406-461742	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
10	nsv540380	chr10:224406-461742	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
11	nsv817534	chr10:224406-503460	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
12	nsv1045404	chr10:224406-520269	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
13	nsv1042404	chr10:224406-567104	Genic enhancers Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
14	nsv540381	chr10:224406-567104	Genic enhancers Bivalent Enhancer Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
15	nsv1046313	chr10:224406-691123	Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
16	nsv540385	chr10:224406-691123	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
17	nsv1036501	chr10:224406-775824	Enhancers Genic enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
18	nsv1052660	chr10:224406-785929	Weak transcription Enhancers Genic enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
19	nsv1043752	chr10:224406-789665	Flanking Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
20	nsv916363	chr10:224406-816628	ZNF genes & repeats Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
21	nsv916591	chr10:224406-1088734	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
22	nsv540386	chr10:224406-1197416	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
23	nsv1039358	chr10:225071-406871	Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
24	nsv540390	chr10:225071-406871	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
25	nsv492071	chr10:226083-291562	Weak transcription Strong transcription Genic enhancers Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
26	nsv530114	chr10:226083-596534	ZNF genes & repeats Weak transcription Strong transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
27	nsv1048660	chr10:235885-330323	Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
28	nsv1037147	chr10:248463-461742	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
29	nsv540391	chr10:248463-461742	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
30	nsv1035580	chr10:248463-832240	Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
31	nsv540392	chr10:248463-832240	Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
32	nsv491747	chr10:248464-451013	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
33	nsv1038164	chr10:248529-456953	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
34	nsv540393	chr10:248529-456953	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
35	nsv894695	chr10:255222-353306	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
36	nsv466693	chr10:255222-566195	Weak transcription Flanking Active TSS Active TSS Genic enhancers Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
37	nsv549750	chr10:255222-566195	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
38	nsv894696	chr10:260544-368295	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
39	nsv894697	chr10:260544-387060	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
40	nsv894698	chr10:273344-387060	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
41	nsv1040466	chr10:278544-626866	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
42	nsv932647	chr10:278852-624284	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:128 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:208200-293000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr10:225000-287400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr10:225600-287400	Weak transcription	Right Ventricle	heart
4	chr10:225600-292400	Weak transcription	Thymus	Thymus
5	chr10:238800-292400	Weak transcription	Psoas Muscle	Psoas
6	chr10:240400-286200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr10:243200-287400	Weak transcription	Fetal Brain Male	brain
8	chr10:243200-287600	Weak transcription	Aorta	Aorta
9	chr10:248000-287200	Weak transcription	Brain Germinal Matrix	brain
10	chr10:248800-287200	Weak transcription	Brain Hippocampus Middle	brain
11	chr10:254800-291600	Weak transcription	HSMMtube	muscle
12	chr10:254800-292600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr10:256800-285600	Weak transcription	A549	lung
14	chr10:257000-287200	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr10:265000-291400	Weak transcription	NHLF	lung
16	chr10:265200-287400	Weak transcription	Rectal Smooth Muscle	rectum
17	chr10:265200-294600	Weak transcription	Fetal Heart	heart
18	chr10:266000-291800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
19	chr10:266200-287400	Weak transcription	NHDF-Ad	bronchial
20	chr10:266200-288400	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr10:266200-292600	Weak transcription	HepG2	liver
22	chr10:266200-292800	Weak transcription	HMEC	breast
23	chr10:270800-292600	Weak transcription	GM12878-XiMat	blood
24	chr10:272200-287400	Weak transcription	Colon Smooth Muscle	Colon
25	chr10:273200-291200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr10:273600-292800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
27	chr10:275200-285400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr10:277800-285200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
29	chr10:277800-287200	Weak transcription	Brain Substantia Nigra	brain
30	chr10:279200-285200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
31	chr10:279600-292600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
32	chr10:280200-287400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr10:281000-285200	Weak transcription	NHEK	skin
34	chr10:281000-285400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr10:281000-292600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr10:281400-290400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr10:281600-292400	Weak transcription	Spleen	Spleen
38	chr10:281600-292800	Weak transcription	Gastric	stomach
39	chr10:281600-292800	Weak transcription	Small Intestine	intestine
40	chr10:281800-286000	Weak transcription	Fetal Intestine Small	intestine
41	chr10:281800-290200	Weak transcription	NH-A	brain
42	chr10:281800-292600	Weak transcription	Esophagus	oesophagus
43	chr10:281800-292600	Weak transcription	Lung	lung
44	chr10:281800-292600	Weak transcription	Stomach Mucosa	stomach
45	chr10:281800-292800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr10:282000-291400	Weak transcription	Colonic Mucosa	Colon
47	chr10:282000-292600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
48	chr10:282000-302400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr10:282200-285400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
50	chr10:282200-285800	Weak transcription	HSMM	muscle

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