Variant report

Variant	rs7930222
Chromosome Location	chr11:106694418-106694419
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1531073	1.00[ASN][1000 genomes]
rs17106108	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106293	1.00[ASN][1000 genomes]
rs72990353	1.00[ASN][1000 genomes]
rs72990360	1.00[ASN][1000 genomes]
rs72994145	1.00[ASN][1000 genomes]
rs72994149	1.00[ASN][1000 genomes]
rs72996333	1.00[ASN][1000 genomes]
rs72996337	1.00[ASN][1000 genomes]
rs72996363	1.00[ASN][1000 genomes]
rs7941031	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556230	chr11:106676942-106704250	Weak transcription Enhancers ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106689600-106699800	Weak transcription	Fetal Heart	heart
2	chr11:106691400-106694600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr11:106694200-106694600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr11:106694400-106694600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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