Variant report

Variant	rs7934191
Chromosome Location	chr11:85874249-85874250
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:85864815..85867737-chr11:85873102..85874804,3	MCF-7	breast:
2	chr11:85873105..85874901-chr11:85877369..85879648,2	MCF-7	breast:
3	chr11:85872034..85874888-chr11:85925507..85928430,2	K562	blood:
4	chr11:85873974..85877106-chr11:85877534..85882400,5	K562	blood:
5	chr11:85859696..85863993-chr11:85872249..85875647,5	K562	blood:
6	chr11:85872408..85874802-chr11:85892436..85894621,2	K562	blood:
7	chr11:85867086..85869713-chr11:85872551..85875438,3	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10792833	0.87[ASN][1000 genomes]
rs11234568	0.90[ASN][1000 genomes]
rs3901732	0.91[ASN][1000 genomes]
rs7107958	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050948	chr11:85756325-85968665	Active TSS Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
2	nsv541117	chr11:85756325-85968665	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
3	nsv832223	chr11:85845315-86015957	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
4	esv2757460	chr11:85869944-85905513	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	esv2759846	chr11:85869944-85905513	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:85865400-85874400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr11:85867400-85875800	Enhancers	Placenta	Placenta
3	chr11:85868000-85876200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr11:85868600-85874600	Enhancers	Fetal Stomach	stomach
5	chr11:85868800-85876600	Enhancers	Hela-S3	cervix
6	chr11:85869000-85874400	Enhancers	NHEK	skin
7	chr11:85870200-85874400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr11:85870200-85875800	Enhancers	Brain Hippocampus Middle	brain
9	chr11:85870400-85875200	Enhancers	Fetal Muscle Leg	muscle
10	chr11:85870600-85874600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr11:85870600-85874800	Enhancers	Ovary	ovary
12	chr11:85870600-85875800	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr11:85870800-85875000	Enhancers	HMEC	breast
14	chr11:85871000-85874400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr11:85871000-85875000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr11:85871000-85876000	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr11:85871200-85874400	Enhancers	Colon Smooth Muscle	Colon
18	chr11:85871200-85874400	Enhancers	Duodenum Mucosa	Duodenum
19	chr11:85871200-85875000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr11:85871600-85875200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr11:85871600-85875400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr11:85871600-85875400	Enhancers	Primary hematopoietic stem cells	blood
23	chr11:85871800-85874400	Enhancers	Rectal Smooth Muscle	rectum
24	chr11:85871800-85874600	Enhancers	A549	lung
25	chr11:85871800-85874600	Enhancers	NH-A	brain
26	chr11:85871800-85876000	Enhancers	Adipose Nuclei	Adipose
27	chr11:85872200-85875400	Enhancers	Muscle Satellite Cultured Cells	--
28	chr11:85872600-85874600	Enhancers	NHDF-Ad	bronchial
29	chr11:85872800-85874600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr11:85872800-85874600	Enhancers	Skeletal Muscle Female	skeletal muscle
31	chr11:85872800-85874800	Enhancers	Osteobl	bone
32	chr11:85873000-85874800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr11:85873000-85875000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr11:85873200-85874600	Enhancers	Stomach Smooth Muscle	stomach
35	chr11:85873200-85875200	Weak transcription	Fetal Intestine Small	intestine
36	chr11:85873400-85878800	Weak transcription	HepG2	liver
37	chr11:85873600-85875000	Weak transcription	Stomach Mucosa	stomach
38	chr11:85873600-85878800	Weak transcription	Left Ventricle	heart
39	chr11:85873600-85883800	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr11:85873600-85883800	Weak transcription	HSMMtube	muscle
41	chr11:85873600-85884000	Weak transcription	Right Atrium	heart
42	chr11:85873800-85874600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
43	chr11:85873800-85875200	Weak transcription	HSMM	muscle
44	chr11:85873800-85883800	Weak transcription	Brain Inferior Temporal Lobe	brain
45	chr11:85874000-85874400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr11:85874000-85874400	Enhancers	Fetal Lung	lung
47	chr11:85874000-85874800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
48	chr11:85874000-85885400	Weak transcription	Small Intestine	intestine
49	chr11:85874200-85874600	Flanking Active TSS	K562	blood
50	chr11:85874200-85875000	Weak transcription	Fetal Intestine Large	intestine

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