Variant report

Variant	rs7936137
Chromosome Location	chr11:8230198-8230199
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11041807	0.84[ASN][1000 genomes]
rs4559683	0.81[ASN][1000 genomes]
rs4627068	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054339	chr11:8153582-8263173	Bivalent Enhancer Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1040979	chr11:8223090-8272605	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8225600-8230600	Enhancers	Primary hematopoietic stem cells	blood
2	chr11:8228800-8230800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr11:8228800-8230800	Weak transcription	Ovary	ovary
4	chr11:8228800-8231000	Enhancers	Primary B cells from peripheral blood	blood
5	chr11:8229000-8231000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr11:8229200-8230600	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr11:8229200-8234800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr11:8229200-8241400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr11:8229400-8230400	Weak transcription	Brain Cingulate Gyrus	brain
10	chr11:8229400-8230800	Weak transcription	Spleen	Spleen
11	chr11:8229400-8231000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr11:8229800-8230400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr11:8229800-8230600	Weak transcription	Brain Hippocampus Middle	brain
14	chr11:8229800-8230600	Weak transcription	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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