Variant report

Variant	rs7936455
Chromosome Location	chr11:15925322-15925323
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:15924300..15926457-chr11:15932975..15935932,2	K562	blood:
2	chr11:15919105..15920647-chr11:15923834..15925463,2	MCF-7	breast:
3	chr11:15924899..15926529-chr11:16635118..16637949,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs2582302	0.98[ASN][1000 genomes]
rs58114630	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59732174	0.93[ASN][1000 genomes]
rs60979357	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73430964	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832073	chr11:15822409-15984078	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15915000-15929200	Weak transcription	Esophagus	oesophagus
2	chr11:15915800-15928400	Weak transcription	Fetal Kidney	kidney
3	chr11:15918400-15928000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr11:15919800-15934400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr11:15920800-15926400	Weak transcription	Psoas Muscle	Psoas
6	chr11:15923400-15925400	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr11:15923400-15927200	Weak transcription	Spleen	Spleen
8	chr11:15923400-15927800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr11:15923400-15928200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr11:15923600-15931600	Weak transcription	Fetal Heart	heart
11	chr11:15923600-15933200	Weak transcription	Right Atrium	heart
12	chr11:15923800-15927800	Weak transcription	Primary neutrophils fromperipheralblood	blood
13	chr11:15923800-15928000	Weak transcription	Primary monocytes fromperipheralblood	blood
14	chr11:15923800-15933200	Weak transcription	Right Ventricle	heart
15	chr11:15924000-15932000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr11:15924200-15926600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr11:15924400-15928400	Weak transcription	Pancreas	Pancrea
18	chr11:15924800-15925600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr11:15924800-15927000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr11:15925000-15925400	Enhancers	Hela-S3	cervix
21	chr11:15925000-15928000	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr11:15925200-15926800	Weak transcription	Gastric	stomach
23	chr11:15925200-15928400	Weak transcription	Lung	lung
24	chr11:15925200-15928600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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