Variant report

Variant	rs7936863
Chromosome Location	chr11:72668730-72668731
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:72664177..72665992-chr11:72667609..72669662,2	K562	blood:
2	chr11:72662658..72664172-chr11:72667529..72669595,2	K562	blood:
3	chr11:72662616..72664158-chr11:72667252..72669595,2	K562	blood:

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs2365906	1.00[MKK][hapmap]
rs2365907	1.00[MKK][hapmap]
rs2449665	1.00[MKK][hapmap]
rs3903492	1.00[MKK][hapmap]
rs493315	1.00[ASW][hapmap];1.00[MKK][hapmap]
rs4944017	1.00[MKK][hapmap]
rs4944799	1.00[MKK][hapmap]
rs4944811	1.00[MKK][hapmap]
rs4944812	1.00[MKK][hapmap]
rs4944817	1.00[MKK][hapmap]
rs4944824	1.00[MKK][hapmap]
rs508532	1.00[ASW][hapmap];1.00[MKK][hapmap]
rs640283	1.00[MKK][hapmap]
rs7122570	1.00[MKK][hapmap]
rs7937866	1.00[MKK][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3394774	chr11:72320884-72694077	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv2422418	chr11:72646518-72807865	Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv555411	chr11:72647296-72800970	Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72633000-72680000	Weak transcription	Dnd41	blood
2	chr11:72633000-72684000	Weak transcription	Primary T cells from cord blood	blood
3	chr11:72633400-72679400	Weak transcription	Fetal Thymus	thymus
4	chr11:72636200-72694800	Weak transcription	Adipose Nuclei	Adipose
5	chr11:72636400-72680200	Weak transcription	Primary T helper cells PMA-I stimulated	--
6	chr11:72636400-72712600	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr11:72637000-72721600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr11:72641800-72680200	Weak transcription	HSMMtube	muscle
9	chr11:72643600-72676400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr11:72643800-72673000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr11:72647200-72670800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr11:72647200-72680800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr11:72649000-72721600	Weak transcription	Thymus	Thymus
14	chr11:72649600-72681600	Weak transcription	Aorta	Aorta
15	chr11:72649800-72679400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
16	chr11:72651400-72696600	Weak transcription	Brain Anterior Caudate	brain
17	chr11:72651600-72680400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr11:72651600-72680600	Weak transcription	Fetal Stomach	stomach
19	chr11:72651800-72674600	Weak transcription	Fetal Muscle Leg	muscle
20	chr11:72651800-72680800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr11:72653400-72681800	Weak transcription	Pancreas	Pancrea
22	chr11:72654000-72671200	Weak transcription	HSMM	muscle
23	chr11:72658400-72671400	Weak transcription	Primary hematopoietic stem cells	blood
24	chr11:72662200-72680800	Weak transcription	Brain Hippocampus Middle	brain
25	chr11:72662600-72670600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
26	chr11:72662600-72674600	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr11:72662600-72680800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
28	chr11:72662800-72671400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr11:72663000-72669000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr11:72663000-72675000	Weak transcription	Liver	Liver
31	chr11:72663200-72673000	Weak transcription	Osteobl	bone
32	chr11:72663200-72682600	Weak transcription	Rectal Mucosa Donor 31	rectum
33	chr11:72663200-72683600	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr11:72663400-72679400	Weak transcription	NHDF-Ad	bronchial
35	chr11:72664400-72672400	Weak transcription	Primary monocytes fromperipheralblood	blood
36	chr11:72664600-72674600	Weak transcription	Primary T cells fromperipheralblood	blood
37	chr11:72665200-72681800	Weak transcription	Fetal Intestine Large	intestine
38	chr11:72665400-72681800	Weak transcription	Fetal Intestine Small	intestine
39	chr11:72666200-72674200	Weak transcription	Placenta	Placenta
40	chr11:72666200-72689600	Weak transcription	Esophagus	oesophagus
41	chr11:72666600-72670800	Weak transcription	Skeletal Muscle Male	skeletal muscle
42	chr11:72666600-72671200	Weak transcription	Skeletal Muscle Female	skeletal muscle
43	chr11:72666600-72675400	Weak transcription	Spleen	Spleen
44	chr11:72666600-72680400	Weak transcription	Ovary	ovary
45	chr11:72666600-72721600	Weak transcription	Lung	lung
46	chr11:72666800-72669200	Weak transcription	Left Ventricle	heart
47	chr11:72667000-72678800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr11:72667000-72700600	Weak transcription	Brain Angular Gyrus	brain
49	chr11:72667200-72671000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr11:72667200-72673600	Strong transcription	Primary B cells from cord blood	blood

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