Variant report

Variant	rs7939341
Chromosome Location	chr11:93340795-93340796
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs7927879	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7940978	0.86[AFR][1000 genomes]
rs7950130	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7951817	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93337800-93342800	Weak transcription	Fetal Intestine Large	intestine
2	chr11:93337800-93343000	Weak transcription	Fetal Intestine Small	intestine
3	chr11:93337800-93343200	Weak transcription	Duodenum Mucosa	Duodenum
4	chr11:93340000-93341000	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr11:93340000-93342600	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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