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Variant report
Variant
rs7942862
Chromosome Location
chr11:33835282-33835283
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:3)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:3 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr11:33833344..33836740-chr11:33839471..33842474,3
K562
blood:
2
chr11:33834196..33839367-chr11:33841251..33846624,5
K562
blood:
3
chr11:33833908..33835978-chr11:33836934..33839034,3
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000255133
Chromatin interaction
Extended variants information (count: 6 )
Associated traits (count: 0)
rSNPs within LD-proxies of this variant (count:6)
rs_ID
r
2
[population]
rs12421529
0.89[AFR][1000 genomes]
rs7929371
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7930124
1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7943000
1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7943418
1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7943437
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links