Variant report

Variant	rs12421529
Chromosome Location	chr11:33835079-33835080
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10768030	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11032377	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11032385	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11601836	0.92[EUR][1000 genomes]
rs11607434	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11608235	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12222602	0.83[EUR][1000 genomes]
rs12419271	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17767323	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs55845089	0.87[EUR][1000 genomes]
rs55933775	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60691031	0.94[EUR][1000 genomes]
rs7929371	0.89[AFR][1000 genomes]
rs7930124	0.89[AFR][1000 genomes]
rs7942862	0.89[AFR][1000 genomes]
rs7943000	0.89[AFR][1000 genomes]
rs7943418	0.89[AFR][1000 genomes]
rs7943437	0.89[AFR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs12421529	CD59	cis	Artery Tibial	GTEx
rs12421529	CD59	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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