Variant report

Variant	rs7953527
Chromosome Location	chr12:120140379-120140380
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11064888	0.93[EUR][1000 genomes]
rs16949584	0.93[EUR][1000 genomes]
rs3182909	0.80[EUR][1000 genomes]
rs35490437	1.00[EUR][1000 genomes]
rs55775618	1.00[EUR][1000 genomes]
rs56074206	1.00[EUR][1000 genomes]
rs61068064	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7297487	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120108200-120161000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr12:120116800-120201800	Weak transcription	Fetal Heart	heart
3	chr12:120117000-120145800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr12:120119200-120141200	Weak transcription	Rectal Smooth Muscle	rectum
5	chr12:120119600-120147000	Weak transcription	Brain Substantia Nigra	brain
6	chr12:120119800-120149800	Weak transcription	Placenta	Placenta
7	chr12:120120200-120148000	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr12:120120400-120145600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr12:120121000-120151800	Weak transcription	Primary T cells from cord blood	blood
10	chr12:120121200-120173400	Weak transcription	Primary B cells from cord blood	blood
11	chr12:120122200-120160800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
12	chr12:120123400-120182000	Strong transcription	Dnd41	blood
13	chr12:120126000-120154000	Weak transcription	Right Ventricle	heart
14	chr12:120126400-120150000	Weak transcription	Primary hematopoietic stem cells	blood
15	chr12:120126600-120158000	Weak transcription	Colonic Mucosa	Colon
16	chr12:120127600-120143200	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr12:120130800-120182200	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr12:120131200-120154200	Weak transcription	Stomach Smooth Muscle	stomach
19	chr12:120131200-120161600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr12:120131600-120142000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr12:120131600-120154400	Weak transcription	Small Intestine	intestine
22	chr12:120131800-120141800	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr12:120131800-120142000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr12:120132000-120145400	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr12:120132200-120151200	Weak transcription	Rectal Mucosa Donor 31	rectum
26	chr12:120132200-120152400	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr12:120132400-120146000	Weak transcription	Brain Germinal Matrix	brain
28	chr12:120132400-120151400	Weak transcription	Pancreas	Pancrea
29	chr12:120132400-120153400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr12:120132800-120162000	Strong transcription	Primary neutrophils fromperipheralblood	blood
31	chr12:120133000-120147800	Weak transcription	Stomach Mucosa	stomach
32	chr12:120133600-120142600	Strong transcription	Primary monocytes fromperipheralblood	blood
33	chr12:120133800-120142000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
34	chr12:120133800-120142000	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr12:120133800-120142400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr12:120133800-120142600	Strong transcription	HUES48 Cell Line	embryonic stem cell
37	chr12:120134200-120142800	Strong transcription	HUES64 Cell Line	embryonic stem cell
38	chr12:120134800-120154400	Strong transcription	HUES6 Cell Line	embryonic stem cell
39	chr12:120135000-120142800	Strong transcription	Cortex derived primary cultured neurospheres	brain
40	chr12:120135800-120148000	Weak transcription	Esophagus	oesophagus
41	chr12:120136000-120141600	Weak transcription	HSMM	muscle
42	chr12:120136000-120142000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
43	chr12:120136000-120145800	Weak transcription	HMEC	breast
44	chr12:120136000-120147800	Weak transcription	Brain Hippocampus Middle	brain
45	chr12:120136000-120151200	Weak transcription	Gastric	stomach
46	chr12:120136000-120156000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
47	chr12:120136200-120141600	Weak transcription	Osteobl	bone
48	chr12:120137000-120140600	Strong transcription	Fetal Stomach	stomach
49	chr12:120137000-120142200	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr12:120137000-120142600	Strong transcription	Thymus	Thymus

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