The 2.0 version of rSNPBase

Variant report

Variant rs55775618
Chromosome Location chr12:120136296-120136297
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:120108200-120161000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:120116800-120201800 Weak transcription Fetal Heart heart
3 chr12:120117000-120145800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr12:120119200-120141200 Weak transcription Rectal Smooth Muscle rectum
5 chr12:120119600-120147000 Weak transcription Brain Substantia Nigra brain
6 chr12:120119800-120149800 Weak transcription Placenta Placenta
7 chr12:120120200-120148000 Weak transcription Placenta Amnion Placenta Amnion
8 chr12:120120400-120137200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr12:120120400-120145600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr12:120120800-120137600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr12:120121000-120151800 Weak transcription Primary T cells from cord blood blood
12 chr12:120121200-120173400 Weak transcription Primary B cells from cord blood blood
13 chr12:120122200-120160800 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr12:120123400-120182000 Strong transcription Dnd41 blood
15 chr12:120126000-120154000 Weak transcription Right Ventricle heart
16 chr12:120126400-120150000 Weak transcription Primary hematopoietic stem cells blood
17 chr12:120126600-120158000 Weak transcription Colonic Mucosa Colon
18 chr12:120127600-120143200 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr12:120129400-120139400 Weak transcription Lung lung
20 chr12:120130800-120182200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr12:120131000-120137600 Weak transcription K562 blood
22 chr12:120131200-120154200 Weak transcription Stomach Smooth Muscle stomach
23 chr12:120131200-120161600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr12:120131400-120137000 Weak transcription Fetal Kidney kidney
25 chr12:120131600-120137400 Weak transcription NH-A brain
26 chr12:120131600-120142000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr12:120131600-120154400 Weak transcription Small Intestine intestine
28 chr12:120131800-120141800 Weak transcription Muscle Satellite Cultured Cells --
29 chr12:120131800-120142000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr12:120132000-120145400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr12:120132200-120137200 Weak transcription HUVEC blood vessel
32 chr12:120132200-120151200 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr12:120132200-120152400 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr12:120132400-120146000 Weak transcription Brain Germinal Matrix brain
35 chr12:120132400-120151400 Weak transcription Pancreas Pancrea
36 chr12:120132400-120153400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr12:120132800-120162000 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr12:120133000-120137200 Weak transcription Fetal Intestine Large intestine
39 chr12:120133000-120147800 Weak transcription Stomach Mucosa stomach
40 chr12:120133600-120142600 Strong transcription Primary monocytes fromperipheralblood blood
41 chr12:120133800-120138000 Strong transcription Fetal Thymus thymus
42 chr12:120133800-120142000 Strong transcription iPS-20b Cell Line embryonic stem cell
43 chr12:120133800-120142000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr12:120133800-120142400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr12:120133800-120142600 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr12:120134200-120142800 Strong transcription HUES64 Cell Line embryonic stem cell
47 chr12:120134400-120139000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr12:120134400-120139800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr12:120134600-120136400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr12:120134600-120137200 Strong transcription Fetal Adrenal Gland Adrenal Gland

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015