Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:10265365..10267011-chr12:10359911..10362410,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10772233	0.90[ASN][1000 genomes]
rs10845030	0.87[ASN][1000 genomes]
rs10845031	0.85[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs10845032	0.87[ASN][1000 genomes]
rs11053575	0.90[ASN][1000 genomes]
rs11053589	1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs12371884	0.91[ASN][1000 genomes]
rs12819522	0.91[ASN][1000 genomes]
rs1814641	0.91[ASN][1000 genomes]
rs2200743	0.88[ASN][1000 genomes]
rs3912643	0.91[ASN][1000 genomes]
rs6488248	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs6488253	0.84[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs6488255	0.84[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs6488261	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7139405	0.91[ASN][1000 genomes]
rs7953886	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7961436	0.84[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs7961483	0.85[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7969125	0.85[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7970859	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7975127	0.81[CHB][hapmap];0.91[JPT][hapmap];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898757	chr12:10229281-10614641	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10264200-10275600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:10264600-10281000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr12:10264800-10266400	Enhancers	Hela-S3	cervix
4	chr12:10264800-10268000	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr12:10265200-10268000	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr12:10265400-10267800	Weak transcription	Primary monocytes fromperipheralblood	blood

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