Variant report

Variant rs7975647
Chromosome Location chr12:83083040-83083041
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:83079400-83084200 Active TSS Fetal Intestine Large intestine
2 chr12:83079600-83083200 Active TSS Psoas Muscle Psoas
3 chr12:83079600-83083600 Active TSS Stomach Smooth Muscle stomach
4 chr12:83079600-83083800 Active TSS Brain Substantia Nigra brain
5 chr12:83079600-83083800 Active TSS Duodenum Smooth Muscle Duodenum
6 chr12:83079600-83083800 Active TSS Rectal Mucosa Donor 29 rectum
7 chr12:83079600-83084000 Active TSS Brain Angular Gyrus brain
8 chr12:83079600-83084000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
9 chr12:83079600-83084000 Active TSS Colon Smooth Muscle Colon
10 chr12:83079600-83084200 Active TSS Brain Anterior Caudate brain
11 chr12:83079600-83084200 Active TSS Brain Cingulate Gyrus brain
12 chr12:83079600-83084200 Active TSS Rectal Smooth Muscle rectum
13 chr12:83079600-83084400 Active TSS Brain Inferior Temporal Lobe brain
14 chr12:83079600-83084400 Active TSS Fetal Stomach stomach
15 chr12:83079600-83084400 Active TSS GM12878-XiMat blood
16 chr12:83079600-83084600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
17 chr12:83079600-83084600 Active TSS Brain Hippocampus Middle brain
18 chr12:83080000-83084200 Active TSS Fetal Muscle Trunk muscle
19 chr12:83081800-83083800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
20 chr12:83081800-83084000 Active TSS Brain Germinal Matrix brain
21 chr12:83082200-83084000 Active TSS Fetal Intestine Small intestine
22 chr12:83082200-83089200 Weak transcription Esophagus oesophagus
23 chr12:83082200-83102200 Weak transcription Lung lung
24 chr12:83082400-83083200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
25 chr12:83082400-83084000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr12:83082400-83086800 Weak transcription Adipose Nuclei Adipose
27 chr12:83082400-83089000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr12:83082600-83083600 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr12:83082600-83083800 Active TSS Cortex derived primary cultured neurospheres brain
30 chr12:83082600-83084200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr12:83082600-83084200 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin03 Skin
32 chr12:83082600-83086400 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr12:83082600-83087200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr12:83082600-83088600 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr12:83082600-83088800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr12:83082600-83094600 Weak transcription Left Ventricle heart
37 chr12:83082800-83083200 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr12:83082800-83083400 Weak transcription Fetal Brain Male brain
39 chr12:83082800-83083800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr12:83082800-83084000 Active TSS Fetal Kidney kidney
41 chr12:83082800-83084000 Active TSS Fetal Muscle Leg muscle
42 chr12:83082800-83084200 Active TSS Fetal Brain Female brain
43 chr12:83082800-83084400 Enhancers Primary monocytes fromperipheralblood blood
44 chr12:83082800-83084600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
45 chr12:83082800-83085800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr12:83082800-83088200 Weak transcription HMEC breast
47 chr12:83082800-83089400 Weak transcription H1 Cell Line embryonic stem cell
48 chr12:83082800-83095200 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr12:83082800-83099400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr12:83082800-83102000 Weak transcription NHDF-Ad bronchial

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