Variant report

Variant rs7980907
Chromosome Location chr12:9601934-9601935
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9599400-9602200 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr12:9599600-9602000 Active TSS HUES64 Cell Line embryonic stem cell
3 chr12:9599600-9602000 Active TSS K562 blood
4 chr12:9599600-9602200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr12:9599600-9602200 Active TSS HUES6 Cell Line embryonic stem cell
6 chr12:9599600-9602200 Active TSS Rectal Mucosa Donor 29 rectum
7 chr12:9599600-9602400 Active TSS HUES48 Cell Line embryonic stem cell
8 chr12:9599600-9602400 Active TSS iPS-15b Cell Line embryonic stem cell
9 chr12:9599600-9602400 Active TSS HepG2 liver
10 chr12:9599600-9602400 Active TSS NHDF-Ad bronchial
11 chr12:9599600-9602600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr12:9599600-9603800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
13 chr12:9599800-9602200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
14 chr12:9599800-9602200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr12:9599800-9602200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr12:9599800-9602400 Active TSS Fetal Kidney kidney
17 chr12:9599800-9602400 Active TSS Rectal Smooth Muscle rectum
18 chr12:9600000-9602200 Active TSS ES-WA7 Cell Line embryonic stem cell
19 chr12:9600000-9602400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:9600000-9602400 Active TSS Fetal Stomach stomach
21 chr12:9600200-9602000 Active TSS Primary hematopoietic stem cells blood
22 chr12:9600200-9602200 Active TSS Stomach Smooth Muscle stomach
23 chr12:9600200-9602400 Active TSS Colon Smooth Muscle Colon
24 chr12:9600400-9603200 Active TSS Duodenum Smooth Muscle Duodenum
25 chr12:9601000-9602400 Flanking Active TSS Dnd41 blood
26 chr12:9601200-9602400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr12:9601200-9602400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr12:9601400-9602000 Enhancers Primary monocytes fromperipheralblood blood
29 chr12:9601400-9602000 Enhancers Primary B cells from cord blood blood
30 chr12:9601400-9602000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr12:9601400-9602000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
32 chr12:9601400-9602000 Enhancers Fetal Brain Male brain
33 chr12:9601400-9602000 Flanking Active TSS A549 lung
34 chr12:9601400-9602000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
35 chr12:9601400-9602200 Flanking Active TSS Primary T cells from cord blood blood
36 chr12:9601400-9602200 Flanking Active TSS Hela-S3 cervix
37 chr12:9601400-9602400 Enhancers Primary B cells from peripheral blood blood
38 chr12:9601400-9602800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr12:9601400-9602800 Weak transcription Right Ventricle heart
40 chr12:9601400-9603000 Weak transcription Psoas Muscle Psoas
41 chr12:9601600-9602000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr12:9601600-9602000 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
43 chr12:9601600-9602000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
44 chr12:9601600-9602000 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr12:9601600-9602000 Enhancers Cortex derived primary cultured neurospheres brain
46 chr12:9601600-9602000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr12:9601600-9602000 Flanking Active TSS Brain Anterior Caudate brain
48 chr12:9601600-9602000 Enhancers Brain Hippocampus Middle brain
49 chr12:9601600-9602000 Enhancers Pancreatic Islets Pancreatic Islet
50 chr12:9601600-9602000 Flanking Active TSS Fetal Lung lung

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