Variant report

Variant	rs799589
Chromosome Location	chr7:96901960-96901961
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs2394620	0.80[EUR][1000 genomes]
rs799588	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs799590	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs799592	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:96900400-96902200	Active TSS	Rectal Mucosa Donor 31	rectum
2	chr7:96900600-96902200	Active TSS	Rectal Mucosa Donor 29	rectum
3	chr7:96901200-96902400	Enhancers	GM12878-XiMat	blood
4	chr7:96901600-96902000	Active TSS	Colonic Mucosa	Colon
5	chr7:96901800-96902000	Flanking Active TSS	Sigmoid Colon	Sigmoid Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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