Variant report

Variant	rs8012540
Chromosome Location	chr14:77957757-77957758
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11850050	1.00[AMR][1000 genomes]
rs11850175	1.00[AMR][1000 genomes]
rs2178874	1.00[AMR][1000 genomes]
rs7141931	0.81[AFR][1000 genomes]
rs760253	0.83[AFR][1000 genomes]
rs760254	0.81[AFR][1000 genomes]
rs8015874	0.81[AFR][1000 genomes]
rs9743492	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832835	chr14:77906706-78095207	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77953400-77964200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr14:77957000-77958800	Enhancers	Placenta	Placenta
3	chr14:77957400-77963200	Weak transcription	HepG2	liver
4	chr14:77957600-77960000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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