Variant report

Variant	rs8015244
Chromosome Location	chr14:81034136-81034137
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs10134220	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7145447	0.92[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8007426	0.83[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81029600-81044800	Weak transcription	Dnd41	blood
2	chr14:81032200-81034400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr14:81032400-81040400	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr14:81033000-81034200	Enhancers	NHEK	skin
5	chr14:81033200-81034200	Enhancers	HMEC	breast
6	chr14:81033400-81034200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr14:81033400-81034400	Enhancers	Placenta Amnion	Placenta Amnion
8	chr14:81033400-81035600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr14:81034000-81034600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr14:81034000-81034800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr14:81034000-81034800	Enhancers	Hela-S3	cervix
12	chr14:81034000-81035000	Enhancers	NH-A	brain
13	chr14:81034000-81035600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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