Variant report

Variant	rs7145447
Chromosome Location	chr14:81054669-81054670
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs17519	0.85[CEU][hapmap];0.82[CHD][hapmap];0.83[ASN][1000 genomes]
rs1871458	0.88[CEU][hapmap];0.86[CHB][hapmap];0.88[CHD][hapmap];0.84[GIH][hapmap]
rs34201956	0.81[ASN][1000 genomes]
rs4903927	0.86[ASN][1000 genomes]
rs6574592	0.83[ASN][1000 genomes]
rs7142417	0.86[CHB][hapmap];0.84[CHD][hapmap];0.80[ASN][1000 genomes]
rs7152126	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7158869	0.82[CEU][hapmap];0.81[CHD][hapmap]
rs8003492	0.82[CHD][hapmap];0.83[ASN][1000 genomes]
rs8007426	0.92[CEU][hapmap]
rs8015244	0.92[CEU][hapmap];0.91[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8018031	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81052400-81070000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr14:81052800-81057200	Weak transcription	Hela-S3	cervix
3	chr14:81054200-81056400	Weak transcription	Primary T cells from cord blood	blood
4	chr14:81054400-81061400	Weak transcription	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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