Variant report

Variant	rs8019955
Chromosome Location	chr14:42497664-42497665
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10459429	0.83[EUR][1000 genomes]
rs12148047	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12586326	0.84[EUR][1000 genomes]
rs12586330	0.85[EUR][1000 genomes]
rs12588452	0.83[EUR][1000 genomes]
rs12588505	0.90[EUR][1000 genomes]
rs12588829	0.83[EUR][1000 genomes]
rs12885538	0.84[EUR][1000 genomes]
rs12893733	0.90[EUR][1000 genomes]
rs1471853	0.91[EUR][1000 genomes]
rs17112532	0.83[EUR][1000 genomes]
rs1763285	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2029183	0.90[EUR][1000 genomes]
rs34606540	0.83[EUR][1000 genomes]
rs34918257	0.85[EUR][1000 genomes]
rs35688153	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61988668	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6572121	0.90[EUR][1000 genomes]
rs9323054	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564563	chr14:42477256-42644617	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:42497200-42499000	Enhancers	Primary B cells from cord blood	blood
2	chr14:42497600-42497800	Enhancers	Placenta Amnion	Placenta Amnion

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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