Variant report

Variant	rs8046981
Chromosome Location	chr16:64844337-64844338
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11647632	0.92[ASN][1000 genomes]
rs12149743	0.97[ASN][1000 genomes]
rs12446421	0.99[ASN][1000 genomes]
rs12446430	0.99[ASN][1000 genomes]
rs12446445	0.89[ASN][1000 genomes]
rs12446489	0.99[ASN][1000 genomes]
rs12933211	0.99[ASN][1000 genomes]
rs1364212	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2032922	0.94[EUR][1000 genomes]
rs4299178	0.96[ASN][1000 genomes]
rs6498962	0.83[ASN][1000 genomes]
rs7191517	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7194168	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9924680	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv572899	chr16:64814244-64870659	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64843200-64847600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr16:64843400-64844400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr16:64843600-64844600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr16:64843800-64844400	Enhancers	Cortex derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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