The 2.0 version of rSNPBase

Variant report

Variant rs8053929
Chromosome Location chr16:73002620-73002621
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72973400-73006400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr16:72987200-73012200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr16:72993400-73003000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr16:72993400-73019600 Weak transcription Hela-S3 cervix
5 chr16:72993600-73003000 Weak transcription Primary hematopoietic stem cells short term culture blood
6 chr16:72993600-73003000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr16:72993600-73003800 Weak transcription Aorta Aorta
8 chr16:72993600-73010400 Weak transcription GM12878-XiMat blood
9 chr16:72993600-73019000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr16:72993800-73009800 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr16:72994200-73004400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr16:72994200-73004400 Weak transcription Esophagus oesophagus
13 chr16:72994200-73006200 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr16:72994200-73009600 Weak transcription Stomach Smooth Muscle stomach
15 chr16:72994400-73012400 Weak transcription A549 lung
16 chr16:72994600-73003000 Weak transcription Gastric stomach
17 chr16:72994600-73008000 Weak transcription Lung lung
18 chr16:72994600-73008400 Weak transcription Ovary ovary
19 chr16:72994800-73010400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr16:72995400-73003200 Weak transcription Brain Cingulate Gyrus brain
21 chr16:72995400-73003800 Weak transcription Right Atrium heart
22 chr16:72995400-73005200 Weak transcription Placenta Amnion Placenta Amnion
23 chr16:72995600-73006200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr16:72995600-73011000 Weak transcription Right Ventricle heart
25 chr16:72996000-73003200 Weak transcription Fetal Lung lung
26 chr16:72996000-73008000 Weak transcription Left Ventricle heart
27 chr16:72996000-73011000 Weak transcription Placenta Placenta
28 chr16:72996000-73012200 Weak transcription Spleen Spleen
29 chr16:72996200-73017800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr16:72996400-73008200 Weak transcription Duodenum Mucosa Duodenum
31 chr16:72996400-73012400 Weak transcription Small Intestine intestine
32 chr16:72996600-73010000 Weak transcription Fetal Intestine Large intestine
33 chr16:72996800-73018800 Weak transcription NHLF lung
34 chr16:72997000-73003800 Weak transcription Pancreas Pancrea
35 chr16:72997000-73017800 Weak transcription HSMMtube muscle
36 chr16:72998000-73003000 Weak transcription Fetal Stomach stomach
37 chr16:72998000-73003200 Weak transcription Fetal Muscle Leg muscle
38 chr16:72998200-73002800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr16:72998200-73002800 Weak transcription Brain Substantia Nigra brain
40 chr16:72998200-73003400 Weak transcription Brain Anterior Caudate brain
41 chr16:72998200-73003600 Weak transcription Fetal Kidney kidney
42 chr16:72998200-73008000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr16:72998400-73002800 Weak transcription Colon Smooth Muscle Colon
44 chr16:72998400-73003200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr16:72998400-73003600 Weak transcription NHDF-Ad bronchial
46 chr16:72998400-73008200 Weak transcription NH-A brain
47 chr16:72998400-73018800 Weak transcription Osteobl bone
48 chr16:72998600-73002800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr16:73000400-73003200 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr16:73000800-73003000 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015