The 2.0 version of rSNPBase

Variant report

Variant rs6416745
Chromosome Location chr16:72998756-72998757
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:72973400-73006400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr16:72987200-73012200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr16:72993400-73002000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr16:72993400-73003000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr16:72993400-73019600 Weak transcription Hela-S3 cervix
6 chr16:72993600-73003000 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr16:72993600-73003000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr16:72993600-73003800 Weak transcription Aorta Aorta
9 chr16:72993600-73010400 Weak transcription GM12878-XiMat blood
10 chr16:72993600-73019000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr16:72993800-73009800 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr16:72994200-73004400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr16:72994200-73004400 Weak transcription Esophagus oesophagus
14 chr16:72994200-73006200 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr16:72994200-73009600 Weak transcription Stomach Smooth Muscle stomach
16 chr16:72994400-73012400 Weak transcription A549 lung
17 chr16:72994600-73003000 Weak transcription Gastric stomach
18 chr16:72994600-73008000 Weak transcription Lung lung
19 chr16:72994600-73008400 Weak transcription Ovary ovary
20 chr16:72994800-73010400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr16:72995400-73003200 Weak transcription Brain Cingulate Gyrus brain
22 chr16:72995400-73003800 Weak transcription Right Atrium heart
23 chr16:72995400-73005200 Weak transcription Placenta Amnion Placenta Amnion
24 chr16:72995600-73001800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr16:72995600-73006200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr16:72995600-73011000 Weak transcription Right Ventricle heart
27 chr16:72996000-73000000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr16:72996000-73000600 Weak transcription HSMM muscle
29 chr16:72996000-73002600 Weak transcription Muscle Satellite Cultured Cells --
30 chr16:72996000-73003200 Weak transcription Fetal Lung lung
31 chr16:72996000-73008000 Weak transcription Left Ventricle heart
32 chr16:72996000-73011000 Weak transcription Placenta Placenta
33 chr16:72996000-73012200 Weak transcription Spleen Spleen
34 chr16:72996200-73017800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr16:72996400-73008200 Weak transcription Duodenum Mucosa Duodenum
36 chr16:72996400-73012400 Weak transcription Small Intestine intestine
37 chr16:72996600-72998800 Enhancers Cortex derived primary cultured neurospheres brain
38 chr16:72996600-73000200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr16:72996600-73001800 Weak transcription Liver Liver
40 chr16:72996600-73010000 Weak transcription Fetal Intestine Large intestine
41 chr16:72996800-73018800 Weak transcription NHLF lung
42 chr16:72997000-73003800 Weak transcription Pancreas Pancrea
43 chr16:72997000-73017800 Weak transcription HSMMtube muscle
44 chr16:72997200-73000000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr16:72997200-73001000 Weak transcription Fetal Intestine Small intestine
46 chr16:72997400-72999200 Weak transcription HepG2 liver
47 chr16:72997600-73002000 Weak transcription Adipose Nuclei Adipose
48 chr16:72998000-73000200 Weak transcription Fetal Muscle Trunk muscle
49 chr16:72998000-73003000 Weak transcription Fetal Stomach stomach
50 chr16:72998000-73003200 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015