Variant report

Variant rs8076621
Chromosome Location chr17:17110213-17110214
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17104200-17110400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr17:17104400-17114000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr17:17104800-17114000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr17:17105000-17116200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr17:17106400-17110400 Enhancers Fetal Brain Male brain
6 chr17:17107600-17110400 Flanking Active TSS Muscle Satellite Cultured Cells --
7 chr17:17108200-17110400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
8 chr17:17108200-17110600 Flanking Active TSS Pancreas Pancrea
9 chr17:17108200-17110600 Flanking Active TSS Stomach Smooth Muscle stomach
10 chr17:17108600-17110400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr17:17109000-17110600 Flanking Active TSS HepG2 liver
12 chr17:17109000-17110600 Flanking Active TSS Osteobl bone
13 chr17:17109400-17110400 Enhancers Primary monocytes fromperipheralblood blood
14 chr17:17109400-17110400 Active TSS Brain Anterior Caudate brain
15 chr17:17109400-17110400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
16 chr17:17109400-17110600 Enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr17:17109400-17110600 Enhancers Fetal Muscle Trunk muscle
18 chr17:17109400-17110600 Enhancers Placenta Placenta
19 chr17:17109400-17114600 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr17:17109400-17120400 Weak transcription Fetal Kidney kidney
21 chr17:17109400-17131600 Weak transcription Fetal Heart heart
22 chr17:17109600-17110400 Enhancers Primary T cells fromperipheralblood blood
23 chr17:17109600-17110400 Enhancers Stomach Mucosa stomach
24 chr17:17109600-17110800 Enhancers Fetal Stomach stomach
25 chr17:17109600-17114000 Weak transcription Fetal Lung lung
26 chr17:17109600-17114200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr17:17109600-17114400 Weak transcription Primary T cells from cord blood blood
28 chr17:17109600-17114600 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr17:17109600-17114800 Weak transcription Aorta Aorta
30 chr17:17109600-17115400 Weak transcription Primary hematopoietic stem cells blood
31 chr17:17109600-17115400 Weak transcription GM12878-XiMat blood
32 chr17:17109600-17116000 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr17:17109600-17116200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr17:17109600-17116200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr17:17109600-17116200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr17:17109600-17116400 Weak transcription Small Intestine intestine
37 chr17:17109600-17118200 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr17:17109600-17124200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr17:17109800-17110400 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr17:17109800-17110400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
41 chr17:17109800-17110400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
42 chr17:17109800-17110400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr17:17109800-17110400 Enhancers Brain Angular Gyrus brain
44 chr17:17109800-17110400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr17:17109800-17110400 ZNF genes & repeats Fetal Intestine Large intestine
46 chr17:17109800-17110400 ZNF genes & repeats Fetal Intestine Small intestine
47 chr17:17109800-17110400 Enhancers Gastric stomach
48 chr17:17109800-17110400 Enhancers Lung lung
49 chr17:17109800-17110400 Enhancers Ovary ovary
50 chr17:17109800-17110400 Flanking Active TSS Rectal Smooth Muscle rectum

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