The 2.0 version of rSNPBase

Variant report

Variant rs8086196
Chromosome Location chr18:29455482-29455483
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:29405600-29481800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr18:29406200-29518600 Weak transcription Fetal Brain Male brain
3 chr18:29408000-29460200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr18:29408600-29471800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
5 chr18:29409000-29456600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr18:29409800-29466600 Weak transcription Gastric stomach
7 chr18:29413800-29456600 Weak transcription Spleen Spleen
8 chr18:29415800-29461800 Weak transcription Fetal Heart heart
9 chr18:29416200-29456600 Weak transcription Aorta Aorta
10 chr18:29417600-29515600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr18:29418400-29470400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr18:29418600-29456600 Weak transcription Right Ventricle heart
13 chr18:29418800-29456600 Weak transcription NHEK skin
14 chr18:29419000-29460400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr18:29419000-29461800 Weak transcription Brain Cingulate Gyrus brain
16 chr18:29419400-29458600 Weak transcription NHLF lung
17 chr18:29425800-29456600 Weak transcription Fetal Brain Female brain
18 chr18:29431800-29461800 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr18:29431800-29499000 Strong transcription Monocytes-CD14+_RO01746 blood
20 chr18:29431800-29512600 Strong transcription Primary monocytes fromperipheralblood blood
21 chr18:29432400-29461200 Weak transcription Psoas Muscle Psoas
22 chr18:29432400-29468200 Weak transcription Small Intestine intestine
23 chr18:29432400-29480000 Weak transcription H9 Cell Line embryonic stem cell
24 chr18:29432600-29481600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr18:29432600-29507600 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr18:29432600-29521400 Weak transcription Stomach Mucosa stomach
27 chr18:29434000-29459000 Weak transcription Hela-S3 cervix
28 chr18:29434000-29460800 Weak transcription A549 lung
29 chr18:29435400-29458800 Strong transcription Rectal Mucosa Donor 29 rectum
30 chr18:29437800-29456600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr18:29438000-29456800 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr18:29438200-29457800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr18:29438200-29458400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr18:29441200-29460400 Weak transcription Brain Hippocampus Middle brain
35 chr18:29443000-29456000 Strong transcription HSMM muscle
36 chr18:29443800-29456800 Weak transcription Brain Germinal Matrix brain
37 chr18:29444600-29455600 Strong transcription HUVEC blood vessel
38 chr18:29445000-29458200 Strong transcription Fetal Intestine Large intestine
39 chr18:29445800-29459400 Strong transcription Primary T helper cells fromperipheralblood blood
40 chr18:29446000-29489000 Strong transcription Fetal Thymus thymus
41 chr18:29446200-29458000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr18:29446800-29459800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr18:29447000-29456000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr18:29447800-29459200 Strong transcription Primary T cells from cord blood blood
45 chr18:29448800-29459200 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr18:29449200-29457000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr18:29449200-29458800 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr18:29449200-29460600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr18:29449200-29489000 Strong transcription Adipose Nuclei Adipose
50 chr18:29449400-29457600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015