The 2.0 version of rSNPBase

Variant report

Variant rs8092166
Chromosome Location chr18:13516687-13516688
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13471000-13537400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr18:13499600-13539200 Weak transcription Gastric stomach
3 chr18:13499800-13531000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr18:13500000-13516800 Weak transcription Duodenum Mucosa Duodenum
5 chr18:13500400-13517400 Weak transcription Spleen Spleen
6 chr18:13501400-13518200 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr18:13501600-13525000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr18:13501800-13530600 Weak transcription Rectal Smooth Muscle rectum
9 chr18:13502800-13525200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr18:13503000-13517000 Weak transcription Adipose Nuclei Adipose
11 chr18:13503000-13519200 Weak transcription Pancreas Pancrea
12 chr18:13503200-13517200 Weak transcription Fetal Lung lung
13 chr18:13503200-13521000 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr18:13503400-13517400 Weak transcription Aorta Aorta
15 chr18:13505000-13536000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr18:13507000-13536400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr18:13511600-13530400 Weak transcription Colon Smooth Muscle Colon
18 chr18:13512000-13518200 Weak transcription Brain Hippocampus Middle brain
19 chr18:13512200-13521600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr18:13512800-13518400 Strong transcription Dnd41 blood
21 chr18:13513200-13516800 Strong transcription Primary monocytes fromperipheralblood blood
22 chr18:13513200-13516800 Weak transcription Fetal Stomach stomach
23 chr18:13513200-13517000 Weak transcription Brain Germinal Matrix brain
24 chr18:13513200-13517200 Weak transcription Fetal Brain Female brain
25 chr18:13513200-13520000 Weak transcription Brain Cingulate Gyrus brain
26 chr18:13513200-13526600 Weak transcription Brain Inferior Temporal Lobe brain
27 chr18:13513200-13538200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr18:13513400-13523800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr18:13513600-13517600 Strong transcription Primary T helper cells fromperipheralblood blood
30 chr18:13513600-13517600 Weak transcription Fetal Intestine Large intestine
31 chr18:13513600-13519400 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr18:13513800-13520200 Strong transcription Primary T cells from cord blood blood
33 chr18:13513800-13520200 Weak transcription Left Ventricle heart
34 chr18:13514000-13520000 Weak transcription Fetal Heart heart
35 chr18:13514000-13520200 Weak transcription Psoas Muscle Psoas
36 chr18:13514000-13523800 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr18:13514200-13517200 Weak transcription Primary hematopoietic stem cells blood
38 chr18:13514200-13517200 Strong transcription Thymus Thymus
39 chr18:13514200-13517800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr18:13514200-13519200 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr18:13514400-13519000 Strong transcription Primary T cells fromperipheralblood blood
42 chr18:13514600-13517800 Strong transcription Primary neutrophils fromperipheralblood blood
43 chr18:13515000-13517000 Weak transcription Fetal Muscle Trunk muscle
44 chr18:13515200-13517200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr18:13515400-13520200 Weak transcription Right Atrium heart
46 chr18:13515600-13516800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr18:13515600-13517600 Strong transcription Primary B cells from cord blood blood
48 chr18:13515600-13519000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr18:13515600-13520000 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr18:13515600-13521000 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015