Variant report

Variant rs8104121
Chromosome Location chr19:52443063-52443064
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52431400-52453200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:52431600-52443400 Weak transcription K562 blood
3 chr19:52432000-52444600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr19:52432200-52443400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr19:52432200-52450800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:52432600-52452800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:52432800-52449400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
8 chr19:52432800-52453000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
9 chr19:52433000-52449000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
10 chr19:52433000-52449400 ZNF genes & repeats Primary hematopoietic stem cells blood
11 chr19:52433000-52449600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr19:52433000-52452800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
13 chr19:52433000-52453000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr19:52433000-52453400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
15 chr19:52433000-52455400 ZNF genes & repeats Liver Liver
16 chr19:52433000-52455400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
17 chr19:52434200-52449200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
18 chr19:52434800-52449000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
19 chr19:52435000-52448600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
20 chr19:52435000-52449000 ZNF genes & repeats Ovary ovary
21 chr19:52435000-52455800 ZNF genes & repeats Adipose Nuclei Adipose
22 chr19:52435200-52444400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr19:52435200-52449400 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
24 chr19:52435600-52448800 ZNF genes & repeats Primary T cells fromperipheralblood blood
25 chr19:52435800-52447600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr19:52437200-52449200 ZNF genes & repeats Primary B cells from cord blood blood
27 chr19:52437400-52447600 Strong transcription Placenta Amnion Placenta Amnion
28 chr19:52437600-52445400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr19:52437600-52446400 Strong transcription Muscle Satellite Cultured Cells --
30 chr19:52437800-52443400 Strong transcription Cortex derived primary cultured neurospheres brain
31 chr19:52437800-52449200 ZNF genes & repeats Primary B cells from peripheral blood blood
32 chr19:52437800-52450000 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
33 chr19:52437800-52452000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr19:52438000-52448600 ZNF genes & repeats GM12878-XiMat blood
35 chr19:52438000-52450200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:52438400-52446600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr19:52438400-52449200 ZNF genes & repeats Dnd41 blood
38 chr19:52438400-52453200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr19:52439200-52443400 Strong transcription NHDF-Ad bronchial
40 chr19:52439200-52453400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr19:52439400-52446200 ZNF genes & repeats Fetal Intestine Large intestine
42 chr19:52439800-52444200 ZNF genes & repeats Placenta Placenta
43 chr19:52439800-52452400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
44 chr19:52440800-52443200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr19:52440800-52443400 Strong transcription iPS-18 Cell Line embryonic stem cell
46 chr19:52440800-52443400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
47 chr19:52440800-52444800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr19:52441000-52443400 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr19:52441000-52443400 Weak transcription Fetal Brain Male brain
50 chr19:52441000-52443400 Weak transcription Fetal Heart heart

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