The 2.0 version of rSNPBase

Variant report

Variant rs8109440
Chromosome Location chr19:41733355-41733356
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41730200-41762600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:41732600-41768800 Weak transcription Small Intestine intestine
3 chr19:41732800-41733400 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr19:41732800-41733400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr19:41732800-41733400 Enhancers Fetal Heart heart
6 chr19:41732800-41733600 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr19:41732800-41734000 Genic enhancers HMEC breast
8 chr19:41732800-41734000 Genic enhancers NHLF lung
9 chr19:41732800-41734200 Enhancers Primary hematopoietic stem cells blood
10 chr19:41732800-41734200 Genic enhancers HSMMtube muscle
11 chr19:41732800-41734400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr19:41732800-41734400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr19:41732800-41735800 Weak transcription Fetal Lung lung
14 chr19:41732800-41736200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:41732800-41739200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr19:41732800-41742800 Weak transcription H9 Cell Line embryonic stem cell
17 chr19:41732800-41745200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr19:41733000-41733400 Enhancers Primary T helper cells fromperipheralblood blood
19 chr19:41733000-41733400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:41733000-41733400 Enhancers Stomach Smooth Muscle stomach
21 chr19:41733000-41733600 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr19:41733000-41733800 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr19:41733000-41733800 Genic enhancers Fetal Muscle Leg muscle
24 chr19:41733000-41734000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr19:41733000-41734000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr19:41733000-41734200 Enhancers K562 blood
27 chr19:41733000-41735400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr19:41733000-41735600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr19:41733000-41735600 Weak transcription Fetal Kidney kidney
30 chr19:41733000-41736000 Weak transcription Lung lung
31 chr19:41733000-41736000 Genic enhancers NHDF-Ad bronchial
32 chr19:41733000-41736200 Weak transcription Pancreas Pancrea
33 chr19:41733000-41736400 Weak transcription Brain Angular Gyrus brain
34 chr19:41733000-41736400 Weak transcription Placenta Amnion Placenta Amnion
35 chr19:41733000-41736600 Weak transcription Aorta Aorta
36 chr19:41733000-41736600 Weak transcription Fetal Muscle Trunk muscle
37 chr19:41733000-41736600 Weak transcription Fetal Stomach stomach
38 chr19:41733000-41738600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr19:41733000-41739200 Weak transcription Placenta Placenta
40 chr19:41733000-41739400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr19:41733000-41739400 Weak transcription Ovary ovary
42 chr19:41733000-41740200 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr19:41733000-41743000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr19:41733000-41743200 Weak transcription Right Ventricle heart
45 chr19:41733000-41743600 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr19:41733000-41743600 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr19:41733000-41743600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr19:41733000-41743600 Weak transcription Esophagus oesophagus
49 chr19:41733000-41743600 Weak transcription Spleen Spleen
50 chr19:41733000-41743800 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015