The 2.0 version of rSNPBase

Variant report

Variant rs8111835
Chromosome Location chr19:19578140-19578141
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19575000-19578200 Weak transcription Fetal Brain Male brain
2 chr19:19575000-19578600 Weak transcription Small Intestine intestine
3 chr19:19575400-19578200 Strong transcription Primary T helper cells fromperipheralblood blood
4 chr19:19575400-19578800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr19:19575600-19578200 Strong transcription Liver Liver
6 chr19:19575600-19581600 ZNF genes & repeats GM12878-XiMat blood
7 chr19:19575800-19578200 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr19:19575800-19578200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr19:19575800-19578200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr19:19575800-19578400 Strong transcription iPS-20b Cell Line embryonic stem cell
11 chr19:19575800-19578600 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr19:19575800-19578800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr19:19575800-19578800 Strong transcription Colonic Mucosa Colon
14 chr19:19575800-19578800 Weak transcription Right Atrium heart
15 chr19:19575800-19579000 Strong transcription Rectal Mucosa Donor 31 rectum
16 chr19:19575800-19579600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr19:19575800-19579800 ZNF genes & repeats Dnd41 blood
18 chr19:19575800-19580000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
19 chr19:19575800-19580600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
20 chr19:19575800-19580800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:19575800-19581600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr19:19576000-19578200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr19:19576000-19578200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr19:19576000-19578400 Strong transcription iPS-18 Cell Line embryonic stem cell
25 chr19:19576000-19578400 Strong transcription Duodenum Smooth Muscle Duodenum
26 chr19:19576000-19578600 Strong transcription Primary T killer memory cells from peripheral blood blood
27 chr19:19576000-19578800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr19:19576000-19578800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
29 chr19:19576000-19578800 Strong transcription Placenta Placenta
30 chr19:19576000-19578800 Strong transcription Osteobl bone
31 chr19:19576000-19579200 Strong transcription Stomach Smooth Muscle stomach
32 chr19:19576000-19579800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr19:19576200-19578200 Strong transcription Primary T helper naive cells fromperipheralblood blood
34 chr19:19576200-19578200 Strong transcription Primary T helper cells PMA-I stimulated --
35 chr19:19576200-19578600 Strong transcription Primary T helper naive cells from peripheral blood blood
36 chr19:19576200-19578600 Strong transcription Brain Substantia Nigra brain
37 chr19:19576200-19579600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr19:19576200-19580000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr19:19576200-19580200 ZNF genes & repeats Thymus Thymus
40 chr19:19576200-19580600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr19:19576200-19580800 ZNF genes & repeats Primary B cells from cord blood blood
42 chr19:19576400-19578200 Strong transcription Rectal Smooth Muscle rectum
43 chr19:19576400-19578200 Strong transcription HUVEC blood vessel
44 chr19:19576400-19578400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr19:19576400-19578400 Strong transcription Muscle Satellite Cultured Cells --
46 chr19:19576400-19578600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr19:19576400-19578800 Strong transcription Brain Angular Gyrus brain
48 chr19:19576400-19579200 ZNF genes & repeats H9 Cell Line embryonic stem cell
49 chr19:19576400-19580000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
50 chr19:19576400-19580600 ZNF genes & repeats Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015