Variant report

Variant	rs8143023
Chromosome Location	chr22:32198142-32198143
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr22:32197597..32200487-chr22:32205328..32206924,2	K562	blood:
2	22:31936958-31958600..22:32188129-32210582	K562	blood:
3	22:32188129-32210582..22:32846948-32860159	K562	blood:

Variant related genes	Relation type
ENSG00000214093	Chromatin interaction
ENSG00000184459	Chromatin interaction

rs_ID	r²[population]
rs12159957	0.85[EUR][1000 genomes]
rs12159985	0.85[EUR][1000 genomes]
rs16989542	0.85[EUR][1000 genomes]
rs16989543	0.85[EUR][1000 genomes]
rs16989544	0.85[EUR][1000 genomes]
rs16989546	0.85[EUR][1000 genomes]
rs16989547	0.85[EUR][1000 genomes]
rs57168894	0.85[EUR][1000 genomes]
rs5753777	1.00[EUR][1000 genomes]
rs5998145	0.85[EUR][1000 genomes]
rs5998146	0.85[EUR][1000 genomes]
rs61731664	0.85[EUR][1000 genomes]
rs61731667	0.85[EUR][1000 genomes]
rs7288786	0.85[EUR][1000 genomes]
rs9680698	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:32150800-32212800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr22:32151000-32210800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr22:32151400-32217400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr22:32159600-32207600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr22:32171200-32204200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
6	chr22:32172200-32254400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr22:32172800-32221000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr22:32175200-32213800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr22:32175800-32202000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr22:32176000-32198600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr22:32176800-32198800	Weak transcription	A549	lung
12	chr22:32176800-32200000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
13	chr22:32178200-32199600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr22:32180000-32198600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr22:32181800-32198600	Weak transcription	NHDF-Ad	bronchial
16	chr22:32182200-32209800	Strong transcription	Fetal Stomach	stomach
17	chr22:32186600-32198400	Weak transcription	K562	blood
18	chr22:32187400-32198800	Weak transcription	Fetal Heart	heart
19	chr22:32187800-32222000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr22:32188000-32220000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr22:32188600-32222600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr22:32188800-32210200	Strong transcription	Fetal Intestine Small	intestine
23	chr22:32188800-32214200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr22:32188800-32259600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
25	chr22:32189000-32202600	Strong transcription	Primary neutrophils fromperipheralblood	blood
26	chr22:32189400-32204200	Strong transcription	HUES48 Cell Line	embryonic stem cell
27	chr22:32189800-32204200	Strong transcription	Fetal Muscle Leg	muscle
28	chr22:32189800-32225200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr22:32190600-32203800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr22:32191600-32207800	Strong transcription	Skeletal Muscle Female	skeletal muscle
31	chr22:32191800-32208000	Strong transcription	Rectal Mucosa Donor 31	rectum
32	chr22:32192200-32209600	Strong transcription	Fetal Intestine Large	intestine
33	chr22:32192400-32203000	Strong transcription	Brain Cingulate Gyrus	brain
34	chr22:32192400-32203200	Strong transcription	Duodenum Smooth Muscle	Duodenum
35	chr22:32192400-32204600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr22:32192400-32208200	Strong transcription	Primary T cells from cord blood	blood
37	chr22:32192400-32242200	Strong transcription	Primary monocytes fromperipheralblood	blood
38	chr22:32192400-32251000	Strong transcription	Primary T helper cells fromperipheralblood	blood
39	chr22:32192400-32266600	Strong transcription	Monocytes-CD14+_RO01746	blood
40	chr22:32192800-32220000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
41	chr22:32193000-32200400	Strong transcription	Colon Smooth Muscle	Colon
42	chr22:32193000-32201400	Strong transcription	Fetal Lung	lung
43	chr22:32193000-32201800	Strong transcription	Brain Germinal Matrix	brain
44	chr22:32193000-32202800	Strong transcription	Primary T helper cells PMA-I stimulated	--
45	chr22:32193000-32203600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
46	chr22:32193000-32204000	Strong transcription	HUES64 Cell Line	embryonic stem cell
47	chr22:32193000-32204200	Strong transcription	Rectal Mucosa Donor 29	rectum
48	chr22:32193000-32207800	Strong transcription	Sigmoid Colon	Sigmoid Colon
49	chr22:32193000-32208600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
50	chr22:32193000-32250600	Strong transcription	Primary T cells fromperipheralblood	blood

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