Variant report

Variant rs816587
Chromosome Location chr10:552689-552690
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:532000-557000 Weak transcription Pancreas Pancrea
2 chr10:537600-556600 Weak transcription HSMM muscle
3 chr10:539800-552800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr10:540000-556400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr10:544600-556800 Weak transcription Placenta Placenta
6 chr10:545200-554800 Weak transcription Ovary ovary
7 chr10:545400-565000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr10:546000-556800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr10:546200-552800 Weak transcription Fetal Intestine Large intestine
10 chr10:546200-555000 Weak transcription Left Ventricle heart
11 chr10:546200-555200 Weak transcription Fetal Brain Male brain
12 chr10:546800-556400 Weak transcription NHLF lung
13 chr10:547000-560200 Weak transcription Aorta Aorta
14 chr10:547200-552800 Weak transcription Brain Substantia Nigra brain
15 chr10:547200-555800 Weak transcription Fetal Brain Female brain
16 chr10:547200-556200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr10:547200-556800 Weak transcription Psoas Muscle Psoas
18 chr10:547400-555400 Weak transcription Brain Cingulate Gyrus brain
19 chr10:547400-555400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr10:547400-556600 Weak transcription Duodenum Mucosa Duodenum
21 chr10:547600-555200 Weak transcription Brain Hippocampus Middle brain
22 chr10:547600-556400 Weak transcription NH-A brain
23 chr10:547800-552800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr10:547800-552800 Weak transcription Adipose Nuclei Adipose
25 chr10:547800-554200 Weak transcription Rectal Smooth Muscle rectum
26 chr10:547800-554400 Weak transcription Osteobl bone
27 chr10:547800-555200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr10:548000-553200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr10:548000-556400 Weak transcription Lung lung
30 chr10:548200-555600 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr10:548600-556800 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr10:548800-556800 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr10:549400-552800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr10:550000-552800 Enhancers Skeletal Muscle Female skeletal muscle
35 chr10:550000-553000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr10:550200-556800 Weak transcription Fetal Kidney kidney
37 chr10:550400-556800 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr10:550600-555600 Weak transcription Esophagus oesophagus
39 chr10:551000-556800 Weak transcription Placenta Amnion Placenta Amnion
40 chr10:551400-552800 Enhancers Primary B cells from peripheral blood blood
41 chr10:551400-552800 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr10:551600-553000 Enhancers Colon Smooth Muscle Colon
43 chr10:551600-553200 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr10:551800-553400 Strong transcription Skeletal Muscle Male skeletal muscle
45 chr10:552000-553200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr10:552000-555400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr10:552000-556600 Strong transcription Fetal Intestine Small intestine
48 chr10:552200-555400 Weak transcription Brain Anterior Caudate brain
49 chr10:552200-555800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr10:552200-557400 Weak transcription Pancreatic Islets Pancreatic Islet

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